Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2146 ATGGCAACCACCGCAACCGCCGCCACCATGTCACATTTTTTCGGCACAAGTCTCTGCAAACCAACCTCAAACATGGGAAGAGTTCGTGCTTTCTTCAACATAGGTACCAAGTTAAAGCCAGCACCTAAGAAAAAGGAAGTGAAAAAAGTGAGAAAACAGGAAAGTGATGGGCTAGTGTGGTTTCCTGGTGCTCAGCCACCGGAATGGCTCGATGGGACGATGATCGGTGACCGTGGTTTTGATCCATTGGGATTAGCCAAACCTGTTGAGTATCTGCAGTTTGATCTTGACTCACTTGACCAGAACTTGGCTAAGAACCTTGCAGGTGATATTATTGGGACTAGGGTTGAGAGTACAGATGTTAACCCTACACCGTTTCAGCCTTACACGGAGGTTTTTGGGATTCAGAGGTTTCGTGAGTGTGAGGTTATTCATGGAAGATGGGCTATGCTTGGTGCTCTTGGTGCTTTGGCTGTTGAAGCTTTCACTGGTGTCGCATGGCAAGATGCTGGAAAGGTAGAGCTGGTGGAAGGATCATCCTACTTTGGATTTTCTCTTCCATTCTCAATTAGCACATTGATATGGATTGAAGTATTAGTAATTGGCTACATTGAGTTTCAAAGGAATGCAGAGCTTGACCCAGAGAAAAGGTTATACCCAGGTGGAAAGTTCTTTGATCCTCTTGGTTTGGCCAGTGATCCTGAAGAGAAAGAAAGACTTCAATTGGCAGAGATTAAGCATTCTCGTTTGGCCATGGTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTTACAGGAAAAGGACCTATTGGTTTCATTGCTACCTTCAACCAGTGA 837 0.4504 MATTATAATMSHFFGTSLCKPTSNMGRVRAFFNIGTKLKPAPKKKEVKKVRKQESDGLVWFPGAQPPEWLDGTMIGDRGFDPLGLAKPVEYLQFDLDSLDQNLAKNLAGDIIGTRVESTDVNPTPFQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGFSLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIGFIATFNQ* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2146 278 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 277 - -
Mtr3g2146 278 Pfam Chlorophyll A-B binding protein 66 262 IPR022796 -
Mtr3g2146 278 Gene3D Chlorophyll a/b binding protein domain 58 278 - -
Mtr3g2146 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 277 IPR001344 GO:0009765|GO:0016020
Mtr3g2146 278 SUPERFAMILY Chlorophyll a-b binding protein 58 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2146 Mtr-Chr3 35026925 35029671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2146 22 275 Chloroplast and Mitochondria Gene Families AT3G08940 71.654 9.15e-130 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2146 K08915 - fve:101300760 437.573