Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2139 ATGAAACCCTTTTTGCACATGTTACATGCACTTTTGCTACTACTATATAATTTAAACATACTTTGGTTTGGCACAAACACATTTGCTTATGCATCAGGAAATGATACAGATTTTTTGGCATTGCTCAAATTCAAGGAATCAATATCCAAAGACTCAAATAGAATCTTAGACTCTTGGAATAGCTCTACACAATTTTGCAAGTGGCATGGAATCACATGCATGAATCAAAGAGTTACAGAATTGAAACTAGAAGGATATAAGTTGCATGGATCTATATCACCTTATGTTGGTAATCTCTCTTTTTTGACAAACTTGAATCTCATGAACAACAGCTTCTATGGAACAATCCCACAAGAATTGTGTAGTTTAGTACAATTACAAAAACTTTACCTCACAAATAACTCATTGGTTGGGGAAATTCCTACAAACTTGTCAAGTTTGTTGAATCTTAAAGACTTATTCTTGCAAGGGAACAATCTTGTTGGCAGAATACCAATTGAAATTGGCTCTCTTAGGAAGCTCCAAAGAGTAAACATTTGGAATAACAATTTAACAGCAGAAATTCCACCATCTATAGAGAATCTTACATCTCTTATTAATCTTAATTTAGGTTCCAACAACTTGGAGGGGAATATTCCACCTGAAATATGTCATTTGAAGAATTTGGCAACTATATCAGTAGGTATAAACAAATTCTCTGGTAACCTTCCACTTTGTCTTTATAATATGTCATCTCTTACTCTACTTGCTGTTGACTTGAACAAATTTAATGGCTCTCTTCCACAAAAAATGTTTCACACTCTTCCCAATCTCAAAACACTTTTCATTGGTGGGAATCAATTCTCAGGTCCAATCCCAACTTCCATATCAAATGCTTCTAACCTTCGATCATTTGATATCACTCAAAACCGATTCACGGGTCAAGTTCCAAATCTTGGGAAGCTAAAAGATCTTCAGCTCATAGGTTTGTCCCAAAACAATCTTGGAAGCAATTCAACTAAAGATTTGGAGTTTATAAAGTCATTGGTGAATTGTAGTAAGTTGTATGTGGTTGATATATCCTACAATAATTTTGGAGGTCCTTTGCCAAATTCCTTGGGAAATATGTCCAACCTCAACAACCTATATCTCGGTGGCAATCATATATTAGGAAAAATTCCCGCGGAATTAGGAAATCTAGCAAACCTATATCTCTTGACCGTGGAAAATAACCGTTTTGAAGGGATTATTCCAGATACTTTCGGAAAGTTTCAAAAGTTGCAAGTGTTAGAATTGAGTGGAAACCGGTTATCTGGAAATATACCAGCTTTTATAGGAAACCTCAGTCAGTTGTTTTATTTAGGTCTAGGAGATAACATATTAGAAGGAAATATTCCTCTAAGCATAGGAAACTGCCAAAAGTTATATCACTTAGACCTTTCGCAAAACAATCTTAGAGGAACCATACCGATAGAGGTTTTTAGTCTCTTCTCACTAACAAGGCTATTGGACTTGTCGGGAAACTTGTTGAGTGGTAGTCTACTACAAGAAGTAGGCAGGCTAGAAAATATCGGAAAGTTGAATTTTTCTGAGAATAATCTATCTGGTGATATTCCTAGAACGATTGGGGAATGCGTAAGCTTGGAGTACCTTTATTTGCAAGGAAATTCCTTCCATGGAGTCATACCAACCTCTCTAGCTTCACTGAAAGGCCTTCAACATTTAGACCTATCACGAAACCACTTGTCTGGATCAATTCCTAAAGGTCTACAAAATATTTCTTTCCTACAATACTTCAATGTATCTTTTAACATGTTGGAAGGCGAGGTACCAACGGAAGGTGTCTTTCAAAATTCAAGTGAGGTGGCGGTAACAGGCAACAATAACCTTTGTGGAGGTGTTTCAAAATTGCACCTACCTCCATGCCCTTTAAAAGGAGAGAAACATTCAAAACATCGTGATTTCAAGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTCTTATACTTCTATTTATCCTAACTATCTATTGCAGAAGGAAAAGAAACAAGAAACCTTATTCCGATTCACCAACAATTGACCTTCTTGTTAAGATTTCATATGAAGACTTGTATAATGGAACCGATGGATTCTCAACAAGAAATTTGATAGGATTTGGAAATTTTGGCTCTGTATACCTAGGAACTCTTGAGTTCGAGGATACAGTCGTAGCCATAAAGGTTTTGAAGCTTCATAAGAAAGGAGCTCACAAGAGTTTCCTTGCTGAATGCAATGCACTCAAAAATATTAGACACCGAAATTTGGTTAAGATTTTAACAAGCTGTTCCAGTACAGATTTCAAAGATCAAGAATTTAAAGCTCTTGTTTTCGAGTACATGAAAAACGGAAGCTTAGAAAGTTGGTTGCATCCAGCAAAAGAAATTGCAGGTCCAGAAAAAACATTGAATCTAGCACAAAGGTTAAATATTATTATTGACGTTGCTTCGGCATTTCATTATCTTCATCATGAATGTCAGCAACCTGTCATTCATTGTGATTTAAAGCCTAGCAACGTTCTTCTTGATGATTCTATGGTAGCTCATGTGAGTGATTTTGGCATAGCAAAGTTGCTTCCAAGTATTGGAGTCTCACTGATGCAAAATAGTACTGTTGGAATACAAGGGACAATTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTAAGCTTTCAGTTGAAGGCGACATGTATAGCTTCGGAATTCTAATTTTAGAAATGCTGACCGCAAGGAGACCTACAGATGAAATGTTTGAAGATAGTTATAGTCTCCATAATTTTGTTAAAATTTCAATTTCGAACGATCTTTTGCAGATTGTGGATCCAGCCATTATTCGCAACGAATTGGAAGGGGCTACTGGCAGTGGTTTTATGCATTCTAATGTAGAGAAATGTTTAATTTCACTTTTTAGTATTGCACTTGGTTGTTCAATGGAATCACCAAAAGAAAGGATGAGTATGGTTGAAGTCATTAGAGAGCTTAATATAATTAAAAGTTTCTTTCCTACTGGGGATCAAGCTGAATTACAACCACAAAAAAGTATGATGTAA 3069 0.3597 MKPFLHMLHALLLLLYNLNILWFGTNTFAYASGNDTDFLALLKFKESISKDSNRILDSWNSSTQFCKWHGITCMNQRVTELKLEGYKLHGSISPYVGNLSFLTNLNLMNNSFYGTIPQELCSLVQLQKLYLTNNSLVGEIPTNLSSLLNLKDLFLQGNNLVGRIPIEIGSLRKLQRVNIWNNNLTAEIPPSIENLTSLINLNLGSNNLEGNIPPEICHLKNLATISVGINKFSGNLPLCLYNMSSLTLLAVDLNKFNGSLPQKMFHTLPNLKTLFIGGNQFSGPIPTSISNASNLRSFDITQNRFTGQVPNLGKLKDLQLIGLSQNNLGSNSTKDLEFIKSLVNCSKLYVVDISYNNFGGPLPNSLGNMSNLNNLYLGGNHILGKIPAELGNLANLYLLTVENNRFEGIIPDTFGKFQKLQVLELSGNRLSGNIPAFIGNLSQLFYLGLGDNILEGNIPLSIGNCQKLYHLDLSQNNLRGTIPIEVFSLFSLTRLLDLSGNLLSGSLLQEVGRLENIGKLNFSENNLSGDIPRTIGECVSLEYLYLQGNSFHGVIPTSLASLKGLQHLDLSRNHLSGSIPKGLQNISFLQYFNVSFNMLEGEVPTEGVFQNSSEVAVTGNNNLCGGVSKLHLPPCPLKGEKHSKHRDFKLIAVIVSVVSFLLILLFILTIYCRRKRNKKPYSDSPTIDLLVKISYEDLYNGTDGFSTRNLIGFGNFGSVYLGTLEFEDTVVAIKVLKLHKKGAHKSFLAECNALKNIRHRNLVKILTSCSSTDFKDQEFKALVFEYMKNGSLESWLHPAKEIAGPEKTLNLAQRLNIIIDVASAFHYLHHECQQPVIHCDLKPSNVLLDDSMVAHVSDFGIAKLLPSIGVSLMQNSTVGIQGTIGYAPPEYGMGSKLSVEGDMYSFGILILEMLTARRPTDEMFEDSYSLHNFVKISISNDLLQIVDPAIIRNELEGATGSGFMHSNVEKCLISLFSIALGCSMESPKERMSMVEVIRELNIIKSFFPTGDQAELQPQKSMM* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2139 1022 Pfam Protein kinase domain 707 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2139 1022 SUPERFAMILY Protein kinase-like (PK-like) 678 1002 IPR011009 -
Mtr3g2139 1022 ProSiteProfiles Protein kinase domain profile. 705 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2139 1022 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Mtr3g2139 1022 Gene3D Phosphorylase Kinase; domain 1 688 786 - -
Mtr3g2139 1022 Gene3D Ribonuclease Inhibitor 347 636 IPR032675 -
Mtr3g2139 1022 PANTHER OS04G0122200 PROTEIN 22 1010 - -
Mtr3g2139 1022 Gene3D Transferase(Phosphotransferase) domain 1 787 1012 - -
Mtr3g2139 1022 Gene3D Ribonuclease Inhibitor 34 188 IPR032675 -
Mtr3g2139 1022 SMART LRR_typ_2 417 441 IPR003591 -
Mtr3g2139 1022 SMART LRR_typ_2 171 194 IPR003591 -
Mtr3g2139 1022 SMART LRR_typ_2 195 219 IPR003591 -
Mtr3g2139 1022 SMART LRR_typ_2 268 292 IPR003591 -
Mtr3g2139 1022 SMART LRR_typ_2 393 416 IPR003591 -
Mtr3g2139 1022 SMART LRR_typ_2 514 538 IPR003591 -
Mtr3g2139 1022 SMART LRR_typ_2 562 585 IPR003591 -
Mtr3g2139 1022 SMART LRR_typ_2 123 147 IPR003591 -
Mtr3g2139 1022 SMART LRR_typ_2 465 489 IPR003591 -
Mtr3g2139 1022 Pfam Leucine rich repeat 540 599 IPR001611 GO:0005515
Mtr3g2139 1022 Pfam Leucine rich repeat 395 452 IPR001611 GO:0005515
Mtr3g2139 1022 Pfam Leucine rich repeat 245 305 IPR001611 GO:0005515
Mtr3g2139 1022 Gene3D Ribonuclease Inhibitor 189 343 IPR032675 -
Mtr3g2139 1022 SMART serkin_6 705 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2139 1022 ProSitePatterns Protein kinases ATP-binding region signature. 711 734 IPR017441 GO:0005524
Mtr3g2139 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Mtr3g2139 1022 PANTHER LRR RECEPTOR-LIKE KINASE 22 1010 - -
Mtr3g2139 1022 SUPERFAMILY RNI-like 362 610 - -
Mtr3g2139 1022 SUPERFAMILY L domain-like 35 328 - -
Mtr3g2139 1022 SMART LRR_sd22_2 417 443 - -
Mtr3g2139 1022 SMART LRR_sd22_2 562 588 - -
Mtr3g2139 1022 SMART LRR_sd22_2 123 146 - -
Mtr3g2139 1022 SMART LRR_sd22_2 465 486 - -
Mtr3g2139 1022 SMART LRR_sd22_2 369 395 - -
Mtr3g2139 1022 SMART LRR_sd22_2 268 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2139 Mtr-Chr3 34959483 34962947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2139 34 1007 Receptor kinase-like Gene Family AT3G47570 46.512 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr3g2139 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2139 - - gmx:100792724 1288.48