Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2135 ATGGCAAAACATTGTTCTAAAGATTCTAGTGCAGTTACCATCCTCTCAAAATGCACTGTTTTCCCAGACCAAAAATCGACCCTAGCAGACCTCAAACTTTCTATCTCAGACCTTAACATGATATGTTGCCATTACATCCAAAAGGGCAATCTCTTCACATCGCCATCTCTCCCTTCTCAAACACTCGTCCCCCACCTTAAAACCTCTCTCTCTAAAACCCTATCAATCTTCCCCCCACTTGCTGGCCGTTTTGTGACCGACTCTGCCGGTCACATCTTTATCACATGCAATGACTCTGGCGTAGATTTCATCCATGCCAGCGCCACGGATCTCACTATCACTCACCTTTTATCACCACCTGATGTCCATCCAGCATTCAAACAATTCTTCCCATTCCACCGCAAAATCAACTACACTGCTCATTTCTCACCGATTTTAGCTGTTCAGGTAACTTCCCTCGCCGATGGAATCTTCATCGGCATCGCTGTCTCCCATGCCGTCACCGACGGTTCCACCTTCTGGAATTTCTTCAACACGTTTGCAGACATTTCTAGAGGACTCACAGTCGCTAACAGAATCCCGTATTTCCGCCGGGAATCGATCCTGATGTCGAAAGTCCCTGTCCAGTTACCGGAAGGTGAAATCAAAGTATCGTTCAACGCCGACGCGCCTCTCCGTGAGAGAATTTTCACCTTCACTCGAGAATCAATTCAGAAGCTAAAAGCAACGGTGAATAAGAACATTAACCACCGTACATCACCGGAAAATGCTGACGTGGCTGAGATAATATCAAAGATGAAAAACGACGATGCTCAAATGAAAGCGGTTGCAGAAAGAGTAACTGTCGAAACGACAGAGATTTCATCGTTTCAATCACTCAACGCGTTAATGTGGCGATGTGTTACACGCGCGAGGAAACTTGATAGTTCTAAAACGACGACGTATAGAAATGCTGTGAATGTTCGAAGCCGTTTGGAACCAAAGTTACCAGAGTATTACTTCGGGAACGCGATTCAAAGCATTGCCACGTACGCATCAGCGCGTGAAGTCGTTGAAAACGATCTTACATGGAGTGCGATGCAGCTGAGTAAGAGTGTGAAGGAGTACGATAGTGCTACAGTGAGGCGCGTCGCAGGGAAATGGGACGTTGAGCCGAAGTGTTTTCCGATGGGGAATCATGACGGTGCAACTCTTCAGATGGGAAGTTCCCATAGGTTTCCGATGTATGAGAATGATTTTGGATGGGGGCGGCCGTTGGCGGTGAGGAGTGGTGGTGCGAATAAGTTTGATGGGAAGATGTCGGCGTTTCCGGGGAGGAAAGGTGGTGGTGCGGTGGATGTGGAGGTGCTTTTGGCGCCGGAGACGATGGCAAGGCTTGAGAGTGATGAGGAGTTCATGGCCTATGCTTCTTGTCAGCAGTGA 1422 0.4789 MAKHCSKDSSAVTILSKCTVFPDQKSTLADLKLSISDLNMICCHYIQKGNLFTSPSLPSQTLVPHLKTSLSKTLSIFPPLAGRFVTDSAGHIFITCNDSGVDFIHASATDLTITHLLSPPDVHPAFKQFFPFHRKINYTAHFSPILAVQVTSLADGIFIGIAVSHAVTDGSTFWNFFNTFADISRGLTVANRIPYFRRESILMSKVPVQLPEGEIKVSFNADAPLRERIFTFTRESIQKLKATVNKNINHRTSPENADVAEIISKMKNDDAQMKAVAERVTVETTEISSFQSLNALMWRCVTRARKLDSSKTTTYRNAVNVRSRLEPKLPEYYFGNAIQSIATYASAREVVENDLTWSAMQLSKSVKEYDSATVRRVAGKWDVEPKCFPMGNHDGATLQMGSSHRFPMYENDFGWGRPLAVRSGGANKFDGKMSAFPGRKGGGAVDVEVLLAPETMARLESDEEFMAYASCQQ* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2135 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 470 - -
Mtr3g2135 473 Gene3D - 214 461 IPR023213 -
Mtr3g2135 473 Gene3D - 11 209 IPR023213 -
Mtr3g2135 473 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 470 - -
Mtr3g2135 473 Pfam Transferase family 11 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2135 Mtr-Chr3 34931768 34933425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2135 36 460 Monolignol Biosynthesis Gene Families AT5G48930 26.790 9.97e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2135 - - cam:101506439 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2135 3 34931768 34933425 Mtr5g2790 5 36361769 36363627 ECH
Mtr3g2135 3 34931768 34933425 Mtr3g2135 3 34931768 34933425 ECH
Mtr5g2790 5 36361769 36363627 Mtr3g2135 3 34931768 34933425 PCT