Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2132 ATGGCAAAGAAAAACTCCGCCACGGCCGCCGTTAAAGACGACCCACCACCGCAAGAAGACAAAATCGAACAACATGATGAAAACGATGAAGAAACTTCGTCAGAAGCAGGTTCTTCATCTGAAGGAGGGGAAGAAGAAGAAGAATCATCCGAAGAAGAAGCTCCAAAAACCACTCCACCTCCAAAAACCAACCCCAAGAACAATTCAGTAGAAGATGAAGACGAAGAAGAAACTGATACTGATGAAGACGAACCACCTCCAAAAACCAAACCCATTGAACAAACCCTAAAATCAGGAACCAAACCCTCCATAGCACCTGCCAGATCTGGAACCAAACGACCTGCTGAAAACAACGACACCAAACAATCAAACAAGAAGAAAACAACCGAGGAGAAGAATAAGAAGAAGGAGAAAGAGCCGGAGGAGGATGACAATAGCAATAACAAGAAAGCGTCGTTTCAGAGAGTTTTCACGGAGGATGATGAGGTTGCAATTCTCCAAGGGCTTGTTGATTTCACTGCCAAATCAGGGAATGATCCTACTAAGCATCTATCAGCCTTTTACCAAATTGTGAAAAAGTCGGTTCATTTTAAAGTTACGCTTGATCAATTGCGCGATAAGGTTCGGAGGTTGAGGTTGAAGTATGAGAATAAAATTAAGAGTAAGAAGACTCCTACCTTTTCAAAGCCGGTAGAGGAGACAATGTTTGAGCTTTCGAAGAAGATCTGGGGTGGTGGTAAAGTTGATGTTAATGAAGGTGAAGAGAATGAGAAAGTTAACGGGAAGCCTGCGAAGAAGGAACTGGCTGTTAAGAAAGCAGCAGCAGCGAGGACAACTAAGAAATTGGTGATGGAGCCTGATTCGCCATTGGTGGTTTTGAAGGTGGACAGTGGTAATGGAAAGGAGGATACTGGTTTGAGTTTGGTTTCGAATGAAACAATTCATTTTGAGCCGGTTATAGATGTGGTGAAGAGGGGAGTGGAGTCGATCGAGGAATCAAAGAGGGGTGAATTGGAGAGATTGATGAATAAGTACAAAATTGCTGAAATGGAGCTGTTTATGCAGAAAACCGAGTTGGCTAAGGAAACGGCTACCAAGATAAGGGATGCATTGAATTCATCATCAAGCCATTAG 1134 0.4312 MAKKNSATAAVKDDPPPQEDKIEQHDENDEETSSEAGSSSEGGEEEEESSEEEAPKTTPPPKTNPKNNSVEDEDEEETDTDEDEPPPKTKPIEQTLKSGTKPSIAPARSGTKRPAENNDTKQSNKKKTTEEKNKKKEKEPEEDDNSNNKKASFQRVFTEDDEVAILQGLVDFTAKSGNDPTKHLSAFYQIVKKSVHFKVTLDQLRDKVRRLRLKYENKIKSKKTPTFSKPVEETMFELSKKIWGGGKVDVNEGEENEKVNGKPAKKELAVKKAAAARTTKKLVMEPDSPLVVLKVDSGNGKEDTGLSLVSNETIHFEPVIDVVKRGVESIEESKRGELERLMNKYKIAEMELFMQKTELAKETATKIRDALNSSSSH* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2132 377 Pfam Protein of unknown function, DUF573 153 244 IPR007592 GO:0006355
Mtr3g2132 377 PANTHER STOREKEEPER PROTEIN 14 374 - -
Mtr3g2132 377 Coils Coil 331 351 - -
Mtr3g2132 377 MobiDBLite consensus disorder prediction 114 156 - -
Mtr3g2132 377 MobiDBLite consensus disorder prediction 33 52 - -
Mtr3g2132 377 Coils Coil 118 138 - -
Mtr3g2132 377 PANTHER BNAANNG10740D PROTEIN-RELATED 14 374 IPR007592 GO:0006355
Mtr3g2132 377 MobiDBLite consensus disorder prediction 14 32 - -
Mtr3g2132 377 Coils Coil 201 221 - -
Mtr3g2132 377 MobiDBLite consensus disorder prediction 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2132 Mtr-Chr3 34892635 34894106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2132 86 373 GeBP Transcription Factor Family AT4G25210 35.048 8.73e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Mtr3g2132 DUF573 2.6e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2132 - - mtr:MTR_3g070120 572.007