Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr3g2088 | ATGAATGAAGAAGAAGAAGAACAACAATGGTTTGAGAGTTTGTTTCAATCTCAAGTTGGTTGTGACATTGTTTTTAAGGTCAAGTGTGAAAGCTTTAAGGCTCATAAGGTGATTCTTGCTGCGAGGTCGCCTGTGTTTATAGCTCAGTTTTTTGGACATGTTGGGGATCCTTGCTTAGAGGAAGTAGTGGTGGAGAAGATTGAACCCTTTATCTTCAAGGCGATGCTTCTCTTCATTTACTCGGGCAAACTTCCTGATATCTATGAGGTTATGGGCTCAATACATGTGTGCTCTTTTACTGTCATGGTGCAGCATCTATTGGCTGCTGCTGATCTCTATAATCTTGACAGGCTAAAAATGTTATGTGAATCAAAATTGTGTGAAGAAATCAATACTGAGACCGTAGCCACGACACTTGCCCTGGCTGAGCAACACCATTGTCCACAGCTCAAGACGATCTGTTTGAAATTTATTGCAAATCCGACAAATTTGGGAGCTGTAGTGCAATCCAAAGCTTTTTTGCATTTAAAAGAGGGCTGCCCTTCAATGTTATTAGAATTGCTGGAGACATTTGCATCAGTGGATGATAACTCAGGTCAGAAGTTGAGCAGGAAAAGAAGTAGCAGTAGCATATATGGGCAAGATTTAGCAAATGGAGGGGCAGCAGAAGCAGCAAATCCAAATGGCGGGCGTAAAAGTATTTTACAGTCTGTATCTTCAACCCTGAAAAGTTATGAAACTGTCTGTCAATACGAGTGA | 759 | 0.4111 | MNEEEEEQQWFESLFQSQVGCDIVFKVKCESFKAHKVILAARSPVFIAQFFGHVGDPCLEEVVVEKIEPFIFKAMLLFIYSGKLPDIYEVMGSIHVCSFTVMVQHLLAAADLYNLDRLKMLCESKLCEEINTETVATTLALAEQHHCPQLKTICLKFIANPTNLGAVVQSKAFLHLKEGCPSMLLELLETFASVDDNSGQKLSRKRSSSSIYGQDLANGGAAEAANPNGGRKSILQSVSSTLKSYETVCQYE* | 253 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr3g2088 | 252 | Pfam | BTB/POZ domain | 11 | 128 | IPR000210 | GO:0005515 | |
| Mtr3g2088 | 252 | PANTHER | BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 | 9 | 202 | IPR045005 | GO:0016567 | |
| Mtr3g2088 | 252 | Gene3D | - | 131 | 210 | - | - | |
| Mtr3g2088 | 252 | Gene3D | Potassium Channel Kv1.1; Chain A | 2 | 130 | IPR011333 | - | |
| Mtr3g2088 | 252 | ProSiteProfiles | BTB domain profile. | 21 | 84 | IPR000210 | GO:0005515 | |
| Mtr3g2088 | 252 | SMART | BTB_4 | 21 | 130 | IPR000210 | GO:0005515 | |
| Mtr3g2088 | 252 | PANTHER | BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 3 | 9 | 202 | - | - | |
| Mtr3g2088 | 252 | SUPERFAMILY | POZ domain | 9 | 128 | IPR011333 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr3g2088 | Mtr-Chr3 | 34376797 | 34380969 | Transposed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | TRAF | Mtr3g2088 | BTB | 7.5e-25 | CL0033 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr3g2088 | K10523 | - | gmx:100778300 | 364.77 |
Event-related genes