Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2084 ATGGCTGGAATGTGTTGTGGTGTTGTTGGTGAAGGTGACTCACCGGCGAGTTCACGTCCCTCCCGGCGCCGGAATTTGGACTTACTACCATTCAAATACATCGCCGACATGGCGTCCGGAACTTCACGGAAACGCCGGCAACCAGATCTTAAGAAGGATTTCGAAAGCTGTGAAGACTCAAGCGACGAGAAAAGTGACAGAAGTAAGAAAAACAAGAAGGAAGATAGAGAAAAACCTTCAACAGAAGGTAATTTCGAAGTTGAAGAGTGTCCAAAATTCGGTGTTACTTCAGTTTGTGGTAGAAGAAGAGATATGGAAGATTCAGTTTCAGTTAAACCTTGTTTCTCTTCACAAGAACCTTTTCACTACTTCGGTGTTTTCGACGGTCACGGTTGCTCTCATGTTGCTACTATGTGTAAAGAGAGACTTCACGAAATTGTGAAGGAAGAAATGAACGAAGGACAAGAGAATTTAGAATGGAACAACACCATGCAACAAGGCTTTGCTCGCATGGATGATGAAGTTCAAAGATGGAACAGCAGTAGTCAAAGTGTTACTTGTAGATGTGAGCTTCAAACTCCTCACTGTGATGCTGTTGGATCCACAGCTGTTGTAGCTGTTGTTACTCCAAACAAAATTATCGTTTCAAACTGTGGTGATTCAAGAGCTGTTCTTTGCCGTAATGGTGTCGCTATTCCTCTCTCCTCAGATCATAAACCGGATCGACCCGATGAATTACTCCGAGTCGAAGCAGCCGGAGGACGTGTGATCTATTGGGATGGTCCAAGAGTTCTTGGAGTACTTGCCATGTCTAGAGCCATAGGTGACAATTATTTGAAACCTTATGTGATATCTGAGCCTGAGGTAACGGTAACGGAACGAAAAGAAGAAGATGAGTGTTTGATCCTAGCGAGTGATGGACTATGGGATGTTGTTTCAAACGACACTGCTTGTGGTGTTGTAAGGATGTGTTTGAAGGCACAGAAGCTGCCGGGGACACCGGAAAACAACGAGGTGACGACGGATGGTTCTGATAGGGCATGTTCCGATGCTTCAATTTTGTTGACTAAGTTGGCTTTGGCAAGACATAGTTCGGATAATGTTAGTGTGGTGGTGATTGATTTGAGGAGAGATCAACGACAAGCATCAAATTCCAACAATAATTAA 1167 0.4396 MAGMCCGVVGEGDSPASSRPSRRRNLDLLPFKYIADMASGTSRKRRQPDLKKDFESCEDSSDEKSDRSKKNKKEDREKPSTEGNFEVEECPKFGVTSVCGRRRDMEDSVSVKPCFSSQEPFHYFGVFDGHGCSHVATMCKERLHEIVKEEMNEGQENLEWNNTMQQGFARMDDEVQRWNSSSQSVTCRCELQTPHCDAVGSTAVVAVVTPNKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERKEEDECLILASDGLWDVVSNDTACGVVRMCLKAQKLPGTPENNEVTTDGSDRACSDASILLTKLALARHSSDNVSVVVIDLRRDQRQASNSNNN* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2084 388 PANTHER ALPHABET, ISOFORM E-RELATED 29 379 - -
Mtr3g2084 388 MobiDBLite consensus disorder prediction 1 25 - -
Mtr3g2084 388 MobiDBLite consensus disorder prediction 37 83 - -
Mtr3g2084 388 Gene3D - 87 385 IPR036457 -
Mtr3g2084 388 SMART PP2C_SIG_2 104 375 IPR001932 -
Mtr3g2084 388 ProSiteProfiles PPM-type phosphatase domain profile. 92 375 IPR001932 -
Mtr3g2084 388 CDD PP2Cc 92 375 IPR001932 -
Mtr3g2084 388 SMART PP2C_4 80 373 IPR001932 -
Mtr3g2084 388 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Mtr3g2084 388 PANTHER PROTEIN PHOSPHATASE 2C 37 29 379 - -
Mtr3g2084 388 Pfam Protein phosphatase 2C 93 367 IPR001932 -
Mtr3g2084 388 SUPERFAMILY PP2C-like 91 376 IPR036457 -
Mtr3g2084 388 MobiDBLite consensus disorder prediction 42 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2084 Mtr-Chr3 34321636 34323435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2084 33 377 PP2C-type Phosphatase Gene Family AT2G29380 60.511 2.35e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2084 K14497 - gmx:100796161 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2084 3 34321636 34323435 Mtr5g2740 5 35732877 35735101 ECH
Mtr3g2084 3 34321636 34323435 Mtr3g2084 3 34321636 34323435 ECH
Mtr3g2084 3 34321636 34323435 Mtr5g2740 5 35732877 35735101 PCT