Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2054 ATGATGATGGGTTGCTGCTTTAGTGCAAAGGTCAAAGCTGAGAGTCCTACACATAATGGTTTGAATTCAAAGGTTGTTGGGAGAGAGGAGGATGTTTCGAGTGGTTTAAGTAGAAGGGCCTCTTCTTCATCTGTGCTTCTAAGCTCTAGGACCGAGGGTGAGATATTGCAATCAAACTATTTGAAGTGTTTCACTATCAATGAGGTAAGAGCCGCGACAAGGAACTTTCGTCCAGATAGTATGATTGGCGAAGGTGGATTTGGTTGTGTATTTAAGGGTTGGATCGATGAGCACACACTAGCTCCTACTAAACCAGGTACTGGTTTTGTTATTGCTGTCAAGAGGCTTAACCAAGAAAGCAGTCAGGGACATAGTGAATGGTTGACAGAAATCAATTACCTTGGACAGCTGCATCATCCAAATCTAGTGAAACTGATAGGTTACTGCTTAGAGGATGACTACCGGATTTTGGTATATGAATTTGTGACCAAGGGAAGTTTGGATAATCATTTGTTTAGAAGAGCTTCTTACTTTCAGCCACTCTCTTGGAAAATCCGAATGAAGATAGCTCTTGATTCTGCTAAGGGTCTTGCATTTCTTCACAGTGATGAAGTCGAAGTGATATATCGAGACTTCAAAACTTCTAACATCTTGATTGATTCTAACTATAATGCAAAGCTCTCAGATTTTGGGATGGCAAAAGATGGACCAGAAGGTGGTAAGAGTCATGTCTCTACAAGGATAATGGGCACCCCAGGCTATGCAGCGCCTGAGTATTTGGCCACAGGTCACCTAACTAAAAAGAGCGATGTCTACAGTTTCGGGGTTGTTCTCCTAGAAATTATGTCAGGCAAGCGTGTATTGGATAAAAACCGACCGTCTGGAGAGCATGATTTAGTTGCATGGGCCAAGCCATTACTCATGAGCAAACGTAAGATTTCTCAAGTTATGGATGCTCGTATAGAAGGCCAATACTCATCGCGTGAAGCAATTAAAGTAGCTCATGTTGCAATTCGATGTCTGTCGGCAGAACAAAAATATAGACCAAACATTGACGAGGTGGTGAGATCGTTGGAACAACTTCAGGATTCCAATGACAAAACAAATGGTCATAGCTCAAGCAGCAGTGGTTCAAAACAACATGGAAAAAGCGTCGATGAATCTTTAAGCGGAGAAGGTAATTCTAATATGAGTTCATCTGCTGCTTCTCCTCTCCATCAGTAG 1224 0.4208 MMMGCCFSAKVKAESPTHNGLNSKVVGREEDVSSGLSRRASSSSVLLSSRTEGEILQSNYLKCFTINEVRAATRNFRPDSMIGEGGFGCVFKGWIDEHTLAPTKPGTGFVIAVKRLNQESSQGHSEWLTEINYLGQLHHPNLVKLIGYCLEDDYRILVYEFVTKGSLDNHLFRRASYFQPLSWKIRMKIALDSAKGLAFLHSDEVEVIYRDFKTSNILIDSNYNAKLSDFGMAKDGPEGGKSHVSTRIMGTPGYAAPEYLATGHLTKKSDVYSFGVVLLEIMSGKRVLDKNRPSGEHDLVAWAKPLLMSKRKISQVMDARIEGQYSSREAIKVAHVAIRCLSAEQKYRPNIDEVVRSLEQLQDSNDKTNGHSSSSSGSKQHGKSVDESLSGEGNSNMSSSAASPLHQ* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2054 407 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Mtr3g2054 407 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
Mtr3g2054 407 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2054 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Mtr3g2054 407 SUPERFAMILY Protein kinase-like (PK-like) 48 358 IPR011009 -
Mtr3g2054 407 Pfam Protein tyrosine and serine/threonine kinase 80 358 IPR001245 GO:0004672|GO:0006468
Mtr3g2054 407 PANTHER OS01G0588500 PROTEIN-RELATED 29 383 - -
Mtr3g2054 407 MobiDBLite consensus disorder prediction 362 407 - -
Mtr3g2054 407 PANTHER KINASE 1B 29 383 - -
Mtr3g2054 407 Gene3D Transferase(Phosphotransferase) domain 1 162 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2054 Mtr-Chr3 33906234 33910100 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2054 3 358 Glycoside Hydrolase AT3G07070 41.873 6.22e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr3g2054 PK_Tyr_Ser-Thr 9.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2054 - - gmx:106795104 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2054 3 33906234 33910100 Mtr3g2054 3 33906234 33910100 ECH