Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr3g2054 | ATGATGATGGGTTGCTGCTTTAGTGCAAAGGTCAAAGCTGAGAGTCCTACACATAATGGTTTGAATTCAAAGGTTGTTGGGAGAGAGGAGGATGTTTCGAGTGGTTTAAGTAGAAGGGCCTCTTCTTCATCTGTGCTTCTAAGCTCTAGGACCGAGGGTGAGATATTGCAATCAAACTATTTGAAGTGTTTCACTATCAATGAGGTAAGAGCCGCGACAAGGAACTTTCGTCCAGATAGTATGATTGGCGAAGGTGGATTTGGTTGTGTATTTAAGGGTTGGATCGATGAGCACACACTAGCTCCTACTAAACCAGGTACTGGTTTTGTTATTGCTGTCAAGAGGCTTAACCAAGAAAGCAGTCAGGGACATAGTGAATGGTTGACAGAAATCAATTACCTTGGACAGCTGCATCATCCAAATCTAGTGAAACTGATAGGTTACTGCTTAGAGGATGACTACCGGATTTTGGTATATGAATTTGTGACCAAGGGAAGTTTGGATAATCATTTGTTTAGAAGAGCTTCTTACTTTCAGCCACTCTCTTGGAAAATCCGAATGAAGATAGCTCTTGATTCTGCTAAGGGTCTTGCATTTCTTCACAGTGATGAAGTCGAAGTGATATATCGAGACTTCAAAACTTCTAACATCTTGATTGATTCTAACTATAATGCAAAGCTCTCAGATTTTGGGATGGCAAAAGATGGACCAGAAGGTGGTAAGAGTCATGTCTCTACAAGGATAATGGGCACCCCAGGCTATGCAGCGCCTGAGTATTTGGCCACAGGTCACCTAACTAAAAAGAGCGATGTCTACAGTTTCGGGGTTGTTCTCCTAGAAATTATGTCAGGCAAGCGTGTATTGGATAAAAACCGACCGTCTGGAGAGCATGATTTAGTTGCATGGGCCAAGCCATTACTCATGAGCAAACGTAAGATTTCTCAAGTTATGGATGCTCGTATAGAAGGCCAATACTCATCGCGTGAAGCAATTAAAGTAGCTCATGTTGCAATTCGATGTCTGTCGGCAGAACAAAAATATAGACCAAACATTGACGAGGTGGTGAGATCGTTGGAACAACTTCAGGATTCCAATGACAAAACAAATGGTCATAGCTCAAGCAGCAGTGGTTCAAAACAACATGGAAAAAGCGTCGATGAATCTTTAAGCGGAGAAGGTAATTCTAATATGAGTTCATCTGCTGCTTCTCCTCTCCATCAGTAG | 1224 | 0.4208 | MMMGCCFSAKVKAESPTHNGLNSKVVGREEDVSSGLSRRASSSSVLLSSRTEGEILQSNYLKCFTINEVRAATRNFRPDSMIGEGGFGCVFKGWIDEHTLAPTKPGTGFVIAVKRLNQESSQGHSEWLTEINYLGQLHHPNLVKLIGYCLEDDYRILVYEFVTKGSLDNHLFRRASYFQPLSWKIRMKIALDSAKGLAFLHSDEVEVIYRDFKTSNILIDSNYNAKLSDFGMAKDGPEGGKSHVSTRIMGTPGYAAPEYLATGHLTKKSDVYSFGVVLLEIMSGKRVLDKNRPSGEHDLVAWAKPLLMSKRKISQVMDARIEGQYSSREAIKVAHVAIRCLSAEQKYRPNIDEVVRSLEQLQDSNDKTNGHSSSSSGSKQHGKSVDESLSGEGNSNMSSSAASPLHQ* | 408 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr3g2054 | 407 | Gene3D | Phosphorylase Kinase; domain 1 | 51 | 161 | - | - | |
Mtr3g2054 | 407 | ProSitePatterns | Protein kinases ATP-binding region signature. | 82 | 114 | IPR017441 | GO:0005524 | |
Mtr3g2054 | 407 | ProSiteProfiles | Protein kinase domain profile. | 76 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr3g2054 | 407 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 207 | 219 | IPR008271 | GO:0004672|GO:0006468 | |
Mtr3g2054 | 407 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 358 | IPR011009 | - | |
Mtr3g2054 | 407 | Pfam | Protein tyrosine and serine/threonine kinase | 80 | 358 | IPR001245 | GO:0004672|GO:0006468 | |
Mtr3g2054 | 407 | PANTHER | OS01G0588500 PROTEIN-RELATED | 29 | 383 | - | - | |
Mtr3g2054 | 407 | MobiDBLite | consensus disorder prediction | 362 | 407 | - | - | |
Mtr3g2054 | 407 | PANTHER | KINASE 1B | 29 | 383 | - | - | |
Mtr3g2054 | 407 | Gene3D | Transferase(Phosphotransferase) domain 1 | 162 | 385 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr3g2054 | Mtr-Chr3 | 33906234 | 33910100 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr3g2054 | 3 | 358 | Glycoside Hydrolase | AT3G07070 | 41.873 | 6.22e-96 | 291 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Mtr3g2054 | PK_Tyr_Ser-Thr | 9.7e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr3g2054 | - | - | gmx:106795104 | 578.17 |