Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2050 ATGTTCATGGCTTGCTGCTTTAGGGTCAAAGTTGAGACTTCTAAACATAATGTTGTTGGGAGAGAAGAGGAAGTTTCGAGTGGTTTAAGCTACAAAGCAGCCTCTTCATTTGTGCCTCTAACTTCTAGGACTGAGGATGAGGTATTGCGATCCAACAATTTGACGTGTTTCACTATCAACGAGGTAAGAGCCGCAACAAGGAACTTTCATCCAGATAGTATGATTGGCAAAGGTGGATTTGGTTGTGTATTTAAGGGTTGGATCGATGAGCACACACTAGCCCCGACTAAACAAGGTACTGGTTTTGCCGTTTCTGTGAAGAGGCTCAACGATAAAAGCAATCAGGGACATAGTGAATGGTTGACGGAAATCAATTATCTGGGACAGCTGCATCATCCTAATCTTGTGAAATTGATTGGTTATTGCATAGAGGATGAATGCTGGATTTTGGTATATGAATTTCTTACCAAGGGAAGTTTAGATAATCTTTTGTTTAAAAGGGCTTCTAACTTTCAGCCACTCACATGGAAAATCCGAATGAAGATAGCTCTTGATGTTGCTAAGGGTCTTGCATTTCTTCACAGTGATGAAGTGAATGTGATACATGGAAACTTGAAAACTTCTAAAATCTTGATTGATTCTAACCACAATGCAAAACTATATAATTTTGGGTTGGCAAAAGATATACCAGAAATAGATATGATAGACCCAGATATGGTATATATACAAGGGCCTTACGACGCACCTGAGTATAAACTTATAGGTCACTTGACCAAAAAGAGTGATGTATACGGTTTTGGGGTTGTTCTCCTGGAAATTATGTCGGGAAAACGTGCATTGGATTATAACAGGCCACGATGGGAAAATGATTTAGTTGTGTGGGCGCGGCCATTACTTATCAACAAAGAAAAGATCTATCAAGTCATGGATTCCTGTATAGAAGGTCAATACTCGCCGCATGAAGCAATGGAGGTGGCTCGTATTGCAATTCAATGTCTGTCTTGTAATTCGAAAAATCGACCAAACATTGATGATGTGGTGAGATCATTAGAAAAACTTTAG 1062 0.3945 MFMACCFRVKVETSKHNVVGREEEVSSGLSYKAASSFVPLTSRTEDEVLRSNNLTCFTINEVRAATRNFHPDSMIGKGGFGCVFKGWIDEHTLAPTKQGTGFAVSVKRLNDKSNQGHSEWLTEINYLGQLHHPNLVKLIGYCIEDECWILVYEFLTKGSLDNLLFKRASNFQPLTWKIRMKIALDVAKGLAFLHSDEVNVIHGNLKTSKILIDSNHNAKLYNFGLAKDIPEIDMIDPDMVYIQGPYDAPEYKLIGHLTKKSDVYGFGVVLLEIMSGKRALDYNRPRWENDLVVWARPLLINKEKIYQVMDSCIEGQYSPHEAMEVARIAIQCLSCNSKNRPNIDDVVRSLEKL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2050 353 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2050 353 Gene3D Transferase(Phosphotransferase) domain 1 155 353 - -
Mtr3g2050 353 Pfam Protein tyrosine and serine/threonine kinase 73 350 IPR001245 GO:0004672|GO:0006468
Mtr3g2050 353 Gene3D Phosphorylase Kinase; domain 1 40 154 - -
Mtr3g2050 353 PANTHER KINASE 1B 24 353 - -
Mtr3g2050 353 PANTHER OS01G0588500 PROTEIN-RELATED 24 353 - -
Mtr3g2050 353 SUPERFAMILY Protein kinase-like (PK-like) 48 350 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2050 Mtr-Chr3 33889973 33892060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2050 52 353 Receptor kinase-like Gene Family AT3G58690 40.129 1.44e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr3g2050 PK_Tyr_Ser-Thr 4.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2050 - - gmx:106795104 437.958