Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2049 ATGGATGGCTGCATTAGCTCAAGGGTCAAAACTGAGAGGAAGAGTCATTCATATAACGGTTTGAATTCAAAGGTAGATGGGAGAGAAGATGATACTATGATTGGTTTAATCAGCAATGCCACCTCTTCATGGGCTTTGAAATGCTTCACATTAAAGGAATTAAAAACTGCAACAGGGAACTTGGTTCCAGATAGTCAAGTGACCGAAGATGAGTTTTATGTAAAGGGGTGGATCGATGAGCACACGTTAGGCCCCACTAAACCAGGTTCTGGTTTGACTGTTGCTGTGAAGAAGCTTAACAATGCGAGCCACCAGGAACCCAGTGAATGGTTGAGAAAAATCAACAACATGGGGAAGCTGTGTCATCCTAATCTTGTGAGACTGATTGGTTACTGCTTAGAGGATGTCTACCCAATTTTGGTATATGAATATTTGGACAAGGGAAGTTTTGACAAATGTTTGTTTAAAAGGGGGTCTGATTTCCAGCCACTCTCATGGAAAATGCGAATCAAGATAGCTCTTGATGCTGCAAAGGGTCTTGCATTTCTTCACAGTGAAAAAGTGAATGTGATACATGGAGATTTCAATACTTCTAATATCCTGATTGATTCTAACCACAATGCAAAGTTATCCGATTTTGGGTTGGATAAATATGATGATCCGAACAACTATGCAAGGTTAAATCCGATCACATACGCAGCACCCGAGTATTCCACGACAGGCCACTTGACCAAAAAGAGTGATATATACGGTTTTGGGGTTCTTCTCCTGGAAATTATGTCAGGAAAACGTGCATGGGATTATGATAGGCCACGACGAGAACATAATTTAGTTGTGTGGTCGCAGCCATTACTCGTCAACAAAGACAAGATCTATCAAGTCATGGATTCCCATATAGAAGGCCAATACTCGCCGCATGAAGCAATGGAGGTGGCTCGTATTGCAATTCAATGTCTGTCTTTTAGTTCGAAAAATCGACCAAATATTGATGATGTGGTGAGATCATTAGAAAAACTTTAG 1020 0.4088 MDGCISSRVKTERKSHSYNGLNSKVDGREDDTMIGLISNATSSWALKCFTLKELKTATGNLVPDSQVTEDEFYVKGWIDEHTLGPTKPGSGLTVAVKKLNNASHQEPSEWLRKINNMGKLCHPNLVRLIGYCLEDVYPILVYEYLDKGSFDKCLFKRGSDFQPLSWKMRIKIALDAAKGLAFLHSEKVNVIHGDFNTSNILIDSNHNAKLSDFGLDKYDDPNNYARLNPITYAAPEYSTTGHLTKKSDIYGFGVLLLEIMSGKRAWDYDRPRREHNLVVWSQPLLVNKDKIYQVMDSHIEGQYSPHEAMEVARIAIQCLSFSSKNRPNIDDVVRSLEKL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2049 339 Pfam Protein tyrosine and serine/threonine kinase 86 336 IPR001245 GO:0004672|GO:0006468
Mtr3g2049 339 Gene3D Transferase(Phosphotransferase) domain 1 145 339 - -
Mtr3g2049 339 PANTHER OS01G0588500 PROTEIN-RELATED 45 337 - -
Mtr3g2049 339 Gene3D Phosphorylase Kinase; domain 1 37 144 - -
Mtr3g2049 339 SUPERFAMILY Protein kinase-like (PK-like) 86 336 IPR011009 -
Mtr3g2049 339 PANTHER APK1B, PUTATIVE-RELATED 45 337 - -
Mtr3g2049 339 ProSiteProfiles Protein kinase domain profile. 67 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2049 Mtr-Chr3 33869361 33888997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2049 45 339 Receptor kinase-like Gene Family AT3G58690 39.672 2.64e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr3g2049 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2049 - - mtr:MTR_3g067765 632.869