Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2030 ATGGAGAATTTATTGGGACTTCTCAAAATTCATGTTCAAAGAGGTGTTAATCTTGCTATCAGAGATGTAGTCAGCAGTGATCCTTATGTTGTCATCAAAATGGCAAAACAGAAGCTGAAGACTAGGGTCGTGAAGAAGAATCTAAATCCTGAGTGGAATGAGGACTTGACTTTATCCATTTCAGACCCTCATACTCCAATCCATCTCTATGTGTATGATAAGGACACATTCAGCTTGGATGACAAAATGGGGGACGCTGAGTTTGACATCGGCCCATTTTTTGAAGCAGTGAAGATGCGGTTGGCAGGTCTCCCAAATGAGGCTATAGTTACAAGGGTGCAACCTAGCAGACAAAATTGCTTAGCAGAAGAGAGTCACATTGTTTGGAAAGATGGTAAAATTTTCCAAAACATGGTTCTTAGACTAAGAAATGTCGAATGTGGGGAAGTGGAACTCCAGTTGCACTGGGTTGACATTCCTGGTTCAAAGGTTATGTAG 498 0.4137 MENLLGLLKIHVQRGVNLAIRDVVSSDPYVVIKMAKQKLKTRVVKKNLNPEWNEDLTLSISDPHTPIHLYVYDKDTFSLDDKMGDAEFDIGPFFEAVKMRLAGLPNEAIVTRVQPSRQNCLAEESHIVWKDGKIFQNMVLRLRNVECGEVELQLHWVDIPGSKVM* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2030 165 CDD C2_ArfGAP 5 148 - -
Mtr3g2030 165 SMART C2_3c 7 102 IPR000008 -
Mtr3g2030 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
Mtr3g2030 165 Gene3D C2 domain 3 164 IPR035892 -
Mtr3g2030 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Mtr3g2030 165 Pfam C2 domain 7 92 IPR000008 -
Mtr3g2030 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Mtr3g2030 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2030 Mtr-Chr3 33672802 33675269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2030 38 163 C2H2 Transcription Factor Family AT1G70790 62.500 2.74e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2030 - - pvu:PHAVU_001G230800g 293.123