Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2018 ATGAAGAGAGAACACCAAGAAAGTTTTGGTGGGGGTGTGATTAGCAACAACAACAAAACAAACACCAACCACCTTAACAGCAGCAAAAACATCAACTTTGGTGAATGTTCATCAATGCAAAACACAAACACAAAACAAAACATGTGGAGAGAAGAAAAAGAAACCAACGGTGGTGGAATGGACGAGTTGTTAGCAGCATTAGGTTACAAGGTTCGCTCTTCCGACATGGCTGATGTAGCTCAAAAGCTTGAACAGCTTGAGATGGTTATGGGTAGTGCTCAAGAAGAAGGTATCAATCATCTTTCTTCTGATACTGTTCACTATGACCCAACCGATCTATATTCATGGGTTCAAACCATGCTCACTGAACTCAACCCTGATTCTTCTCAAATCAACGACCCTTTGGCTTCTTTGGGTTCTTCTTCTGAAATCCTCAACAACACTTTCAATGATGATTCTGAGTATGATCTTAGCGCTATTCCTGGAATGGCAGCATACCCACCTCAAGAAGAAAACACAGCTGCTAAACGAATGAAGACTTGGTCTGAACCAGAATCTGAACCGGCGGTAGTGATGTCACCACCGCCGGCGGTGGAAAATACAAGACCGGTGGTTCTTGTTGACACACAAGAAACTGGTGTTCGTCTTGTTCATACTTTAATGGCTTGTGCAGAAGCGATTCAGCAAAAGAATCTGAAACTTGCAGAAGCGCTTGTGAAGCATATAAGCTTATTAGCTTCGTTACAAACCGGTGCGATGAGAAAAGTTGCTTCCTATTTCGCACAAGCACTTGCAAGAAGAATCTACGGTAACCCAGAAGAAACAATCGATTCATCATTCTCAGAAATTCTTCACATGCACTTCTATGAATCTTCACCTTATCTCAAATTCGCTCATTTCACTGCTAATCAAGCTATTCTCGAAGCTTTCGCCGGTGCCGGAAGAGTTCATGTTATAGATTTTGGTCTTAAACAAGGGATGCAATGGCCTGCGCTTATGCAAGCGCTGGCATTACGTCCTGGCGGTCCTCCTACGTTCCGGTTAACCGGCATCGGACCGCCGCAGGCGGACAATACTGATGCTTTGCAACAAGTTGGCTGGAAATTAGCTCAGCTTGCTCAGACAATCGGTGTTCAGTTCGAATTTCGTGGATTTGTTTGTAACAGTATTGCGGATCTTGACCCGAATATGCTTGAGATCCGACCCGGTGAAGCTGTTGCTGTTAACTCCGTTTTCGAGCTTCATACCATGTTAGCTCGACCCGGTTCAGTTGAGAAAGTTCTCAACACTGTTAAGAAGATAAACCCTAAAATCGTAACAATCGTTGAGCAAGAAGCGAATCATAACGGACCGGTTTTCGTAGACCGGTTTACCGAAGCTTTACATTATTACTCAAGCTTATTCGATTCACTGGAGGGTTCGAATTCGAGTTCGAATAATTCCAACTCGAACTCGACCGGGTTGGGTTCACCGAGTCAGGATTTGTTGATGTCAGAGATTTATTTGGGAAAGCAAATATGTAACGTGGTGGCTTATGAAGGAGTGGACCGAGTTGAAAGACATGAGACTTTGACTCAATGGCGGTCTAGGATGGGTTCAGCTGGGTTCGAACCGGTTCATTTGGGTTCAAATGCGTTTAAACAAGCTAGTACTTTGTTAGCTTTGTTTGCTGGTGGTGATGGTTATAGGGTTGAGGAAAATAATGGATGTCTTATGTTAGGGTGGCATACAAGGTCACTCATTGCTACTTCTGCTTGGAAGCTTCCACAAAATGAGTCCAAGTGA 1785 0.4375 MKREHQESFGGGVISNNNKTNTNHLNSSKNINFGECSSMQNTNTKQNMWREEKETNGGGMDELLAALGYKVRSSDMADVAQKLEQLEMVMGSAQEEGINHLSSDTVHYDPTDLYSWVQTMLTELNPDSSQINDPLASLGSSSEILNNTFNDDSEYDLSAIPGMAAYPPQEENTAAKRMKTWSEPESEPAVVMSPPPAVENTRPVVLVDTQETGVRLVHTLMACAEAIQQKNLKLAEALVKHISLLASLQTGAMRKVASYFAQALARRIYGNPEETIDSSFSEILHMHFYESSPYLKFAHFTANQAILEAFAGAGRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQADNTDALQQVGWKLAQLAQTIGVQFEFRGFVCNSIADLDPNMLEIRPGEAVAVNSVFELHTMLARPGSVEKVLNTVKKINPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSNSSSNNSNSNSTGLGSPSQDLLMSEIYLGKQICNVVAYEGVDRVERHETLTQWRSRMGSAGFEPVHLGSNAFKQASTLLALFAGGDGYRVEENNGCLMLGWHTRSLIATSAWKLPQNESK* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2018 594 MobiDBLite consensus disorder prediction 10 36 - -
Mtr3g2018 594 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 588 IPR005202 -
Mtr3g2018 594 MobiDBLite consensus disorder prediction 1 36 - -
Mtr3g2018 594 Gene3D - 59 124 IPR038088 -
Mtr3g2018 594 Pfam GRAS domain family 216 587 IPR005202 -
Mtr3g2018 594 Pfam Transcriptional regulator DELLA protein N terminal 61 127 IPR021914 -
Mtr3g2018 594 Coils Coil 76 96 - -
Mtr3g2018 594 PANTHER DELLA PROTEIN GAI1-RELATED 32 588 IPR030006 GO:0003712|GO:0005634
Mtr3g2018 594 SMART DELLA_2 61 134 - -
Mtr3g2018 594 ProSiteProfiles GRAS family profile. 207 587 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2018 Mtr-Chr3 33369007 33371253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2018 45 588 GRAS Transcription Factor Family AT2G01570 61.246 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr3g2018 GRAS 9.5e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2018 K14494 - gmx:100799695 862.833