Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1994 ATGGTCAAAACAAAAAAAATCTTCTCCCTCGTAATCTTCTCAACTTTCATTCTCCATTCACTTTCCATCTCCACAGACACATTCCTCTACGGTGGGTGCACACAAGAAAAATACACCCCAACCTACGAATCCAACCTAAACTCACTCCTCACATCCCTAATCAACTCAGCAACCTACACATCCTACAATAACTTCACCATCATCTCCTCAAACCCTAACGACATCGTCTACGGCGTCTACCAATGTCGCGGCGACATCTCCATGCCAGACTGCTCCTCCTGCATTGCACGTGCCGTCTCACGCACCGGTGACATATGTCCTGGCGTGTGCGGCGGCGTAGTGCAACTAGAAGGGTGTTATGTGAAATATGACAATGTTAAGTTTTTAGGCATGCAAGATAAAACGATTGTGTTGAAGAAATGTGGGCCTGAAGTAGGGTATGACCCGGGTACGATAGATGCTGTGTTGGGTGGGTTGGCGGGTTCAGGTGGGTTGTTTAGGGTTGGTGGTTCGGGTCAGTTGAAGGGAATGGCACAGTGTGTTGGGGATTTGAGTTTTGTGGAGTGTCAAGATTGTGTTACAGAGGCAATCCGACGGTTGAGAAATGATTGTACTTCTGGGGATTATGGAGATATGTTCTTGGGGAAGTGTTATGCAAGGTACTCTACTGGTGGTGCTGGTGGGGCACATGCTTACTCCAAGCCTCATGGTAAATCAGACCACGATGGTGAGAAGACATTTGCCATAATTATTGGATTATTAGCAGCTGTAGCTATACTCATTATTTTCCTAGCTTTCTTGAGAAGGATTTGTGAGGGACAAGGTAAATGA 831 0.4621 MVKTKKIFSLVIFSTFILHSLSISTDTFLYGGCTQEKYTPTYESNLNSLLTSLINSATYTSYNNFTIISSNPNDIVYGVYQCRGDISMPDCSSCIARAVSRTGDICPGVCGGVVQLEGCYVKYDNVKFLGMQDKTIVLKKCGPEVGYDPGTIDAVLGGLAGSGGLFRVGGSGQLKGMAQCVGDLSFVECQDCVTEAIRRLRNDCTSGDYGDMFLGKCYARYSTGGAGGAHAYSKPHGKSDHDGEKTFAIIIGLLAAVAILIIFLAFLRRICEGQGK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1994 276 Pfam Salt stress response/antifungal 33 125 IPR002902 -
Mtr3g1994 276 Pfam Salt stress response/antifungal 171 223 IPR002902 -
Mtr3g1994 276 ProSiteProfiles Gnk2-homologous domain profile. 129 226 IPR002902 -
Mtr3g1994 276 Gene3D - 25 128 IPR038408 -
Mtr3g1994 276 Gene3D - 158 224 IPR038408 -
Mtr3g1994 276 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 10 272 - -
Mtr3g1994 276 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 10 272 - -
Mtr3g1994 276 ProSiteProfiles Gnk2-homologous domain profile. 23 128 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1994 Mtr-Chr3 33034158 33038199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1994 7 222 Pollen Coat Proteome AT4G20670 26.141 7.47e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1994 - - gmx:100811615 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1994 3 33034158 33038199 Mtr5g2658 5 34628911 34631162 PCT