Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1968 ATGCCCTTGGAAGGGATTTTCATTGAACCAATTTCAACATCAACAACACCACCTGATCTTTCTCTTCAAATAAGTCCTCCAAGTACTTCTAATTCTTCTTTGATTTGCAATAACACAACTCAAACATCAAATTATGAACCTCATAATTCTTCAAGAACAACTTTGGCTCAAGCTCAAGCTCACACTGAACTCTCTCTAGGAAGAAATTTTAGTGTTAGTGGTGGTGCTCAAGAACAACCACAACAACATCAACAACCACATAACCCTTATTATCAAAACCAACAAGCTCATTTTCCTCACTTTCAACATCACAACTCTACAACAACTACAACAAGTACTACAACAAATTCTTCAAGTCACATGAATCACATAAATTATGGTGTTTCATTGCTTGATGTGTCATCAACATCATCAGAAGGGTTAAGACCAATCAAAGGAATTCCAGTTTATCACAACCGTTCATTCCCTTTTCTACCAGCCATGGAACATTCAAGAGAAAAAGATCCCAAGATGTGTTTATATCACCACATGCCTAATTCAACTCCGTCTCCTTCTTCGTCTTCATCTCCTCTTTCCCCCTACATAGCTGCAGGAGGTTTAGATCCCATGTCGTTTTTAAACTCCAGTGGCTCTGCGGCGGCTTATCGAGCCGCCGTAGCCACAAGGTTTAATAACGAACCTTTCAAATCTCATCAATATCCATTGCACCACCATCATCATCATCACTCACACTATGGTAGTGTTGGACTTGGAAGCTCAGAAGCATCCATGATGAGATCAAGGTTTTTGCCTAAATTACCGACAAAAAGAAGCATGAGAGCACCAAGAATGCGATGGACAAGTACTCTTCATGCTAGATTTGTTCATGCTGTTGAGCTTCTTGGTGGCCATGAAAGAGCAACACCAAAGTCAGTTTTGGAACTGATGGATGTGAAGGATCTCACATTAGCTCATGTAAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACAACTGACAAACCTGCAGCTTCTTCAGGCCTTTCAGATGGATCTGGAGAAGATGATGTGCCACAAATTGGAAGCAATGGTGGAATTCGTCAATTTTCAGATCAAAGAGGGCTAACAGATAGACCAATACAGCAAGATATGGATTACTCATCCACCAACACTCTATGGAGTAATTCTTCAAGTAGTAGAGAACCATGGCCACAAACAAGTCCAAACGACATAGATGGTTTCAGACCAACTATCTTCCAATCACAACCAATATCAGGAGGACATCAAATTCAGGAGTGTGATTCAAATCAGCTCAAGAACAATTTGTCAGGATCTAATTTAGAGTGTAAGAACCCAAGCTTGGAGTTCACATTAGGCATACCAGATTGGAATGGCAAAGGACAAGCTTAA 1389 0.4024 MPLEGIFIEPISTSTTPPDLSLQISPPSTSNSSLICNNTTQTSNYEPHNSSRTTLAQAQAHTELSLGRNFSVSGGAQEQPQQHQQPHNPYYQNQQAHFPHFQHHNSTTTTTSTTTNSSSHMNHINYGVSLLDVSSTSSEGLRPIKGIPVYHNRSFPFLPAMEHSREKDPKMCLYHHMPNSTPSPSSSSSPLSPYIAAGGLDPMSFLNSSGSAAAYRAAVATRFNNEPFKSHQYPLHHHHHHHSHYGSVGLGSSEASMMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDVPQIGSNGGIRQFSDQRGLTDRPIQQDMDYSSTNTLWSNSSSSREPWPQTSPNDIDGFRPTIFQSQPISGGHQIQECDSNQLKNNLSGSNLECKNPSLEFTLGIPDWNGKGQA* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1968 462 MobiDBLite consensus disorder prediction 9 32 - -
Mtr3g1968 462 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 275 328 IPR006447 GO:0003677
Mtr3g1968 462 MobiDBLite consensus disorder prediction 70 91 - -
Mtr3g1968 462 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 462 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mtr3g1968 462 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 462 - -
Mtr3g1968 462 SUPERFAMILY Homeodomain-like 272 328 IPR009057 -
Mtr3g1968 462 Gene3D - 274 331 - -
Mtr3g1968 462 MobiDBLite consensus disorder prediction 1 32 - -
Mtr3g1968 462 MobiDBLite consensus disorder prediction 356 410 - -
Mtr3g1968 462 MobiDBLite consensus disorder prediction 330 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1968 Mtr-Chr3 32763924 32770028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1968 1 459 G2-like Transcription Factor Family AT5G16560 41.189 1.86e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr3g1968 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1968 - - ccaj:109796302 618.616