Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1936 ATGGTGCTACAACTTAAACTGATATTCCTAACGTTGGTGTATTGGAACATATTAATTAGTTATGCTGATTGTCTAGTACATGGTGATTCACAAACAAATATGCTATTGAATGGATGTAACATATTCTCCTATACTGATGCAAACATGCGTCGCATATCCTATGAAAACATCAACGAAACTTTTCTAGATTTGAGAAATCAAATTAGCAATCAAAGCAAGCACTTTGCCACATCACAACAACAAGCCATAGATGAGGTAAAAGTATATTCTATGTTTCAATGTAGAAATTACCTCTCCAAAAATGATTGTGTTGCTTGCTTCAACACTGCTTCTACCGAAATCAGTACCTGCGCTTCCATTGGGGCTAGATTTATCTACGATGGGTGTTTCCTCAGATTCGAGACTGAAATATTCTACAATCAAACAACACAACCTGGGAATGGTATGTTATGTGGAAACAAGACTGCAAAAGAAGGCGCTGCATTTGGAACAATTGGACAAAAAGTGCTAATGGATATCCAATTAGCAACACCTAAAATTAAAGGTTTTTTTGCAGCTACTAAGACACAAGTGACACCTGGTGGAAATAGTTCAATTTATGCCATTGCACAGTGTGCTGAAACAGTCACTGAAAGTGGTTGTTTAGATTGTTTGACAGTTGGATACAACAACTTGCAAGCTTGTCTTCCTAACACAGATGGTAGAGCATATGATGCAGGGTGTTTTATGAGATACTCAGAGACACCCTTTTTTGCTGATAATCAGACCATTGATATCACAGCCTACTTGAATCAAGAAACAATTATAGGTGGTGGTGTTGGAGGTTCAAGCAATAAATGGACCATTATATGTGGTGTTGTTGGAGGTGTATGTCTTGCTGTGATCATTCTTGCAATTTTAGTTTGGTTACAATACACAAAACCCAAGAGGGCTCCTAGAGGCAACATATTAGGAGCAACTGAGTTTAAAGGTCCAGTTAACTACAAGTATAGTGATTTGAAAATTGCAACAAAAAACTTTGATGGTGAAAATAAACTAGGAGAAGGGGGCTTTGGTGATGTATACAAAGGTACTCTGAAAAATGGAAATGTTGTAGCAGTCAAGAAACTAGTTTTGGGAAAATCAAACAAGATGGCCCATGATTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTTCATCATAGGAATCTTGTTAAACTTCTTGGTTGTAGCATTAAAAACCAAGAGAGAATTCTTGTTTATGAGTATATGGCAAACAGCAGCCTAGACAAATTCTTATTTGGTAACAAACAAGGTTCCCTCAATTGGAAACAAAGGTGTGATATAATTTTAGGAACAGCAAGAGGGCTGGCCTGTCTTCATGAGGAATTCCACATTTCCATTATACATAGAGATATAAAGACTAGCAATATACTCCTTGATGATAATCTTCACCCCAAAATTGCTGATTTTGGATTGGCGCGGCTTTTGCCAGGGGATCGTTCTCATCTAAGCACTGGAGTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAATTATCAGAAAAGGCTGATACCTACAGCTATGGAATTGTAGTCCTAGAAATCATAAGTGGTCGAAAGAGTACCGAAGTAAAGGAAGATGATGAAGATGGTGAATACCTTCTTAAAAAATCATGGAAACTGCATGAGAGAGGCATGCACTTGGAGCTCGTGGACAAGGCCTTAGACCCTAATGACTATGATGGAGAAGAAGTGAAGAAAATGATAGAGATTGCTCTGTTGTGTACTCAAGCATCAGCTGGAATGAGACCAACAATGTCTGAAGTTGTAGTCCTCCTTCAAACCAGAAGCTTAGCGGAGCACCTGCAACCAACTATGCCTGTGTTTGTAGAAACGAATCTTAGGTCTCGTGAAGGCCACTCTACCTCAACTGGTTCCTCTACGTCTAATGCCACTGCCTCCTTTTCGGTTCTATCAGCTCGATGA 1983 0.3893 MVLQLKLIFLTLVYWNILISYADCLVHGDSQTNMLLNGCNIFSYTDANMRRISYENINETFLDLRNQISNQSKHFATSQQQAIDEVKVYSMFQCRNYLSKNDCVACFNTASTEISTCASIGARFIYDGCFLRFETEIFYNQTTQPGNGMLCGNKTAKEGAAFGTIGQKVLMDIQLATPKIKGFFAATKTQVTPGGNSSIYAIAQCAETVTESGCLDCLTVGYNNLQACLPNTDGRAYDAGCFMRYSETPFFADNQTIDITAYLNQETIIGGGVGGSSNKWTIICGVVGGVCLAVIILAILVWLQYTKPKRAPRGNILGATEFKGPVNYKYSDLKIATKNFDGENKLGEGGFGDVYKGTLKNGNVVAVKKLVLGKSNKMAHDFESEVKLISNVHHRNLVKLLGCSIKNQERILVYEYMANSSLDKFLFGNKQGSLNWKQRCDIILGTARGLACLHEEFHISIIHRDIKTSNILLDDNLHPKIADFGLARLLPGDRSHLSTGVAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGRKSTEVKEDDEDGEYLLKKSWKLHERGMHLELVDKALDPNDYDGEEVKKMIEIALLCTQASAGMRPTMSEVVVLLQTRSLAEHLQPTMPVFVETNLRSREGHSTSTGSSTSNATASFSVLSAR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1936 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Mtr3g1936 660 ProSiteProfiles Protein kinase domain profile. 340 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1936 660 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 20 657 - -
Mtr3g1936 660 Gene3D - 31 138 IPR038408 -
Mtr3g1936 660 Gene3D - 147 250 IPR038408 -
Mtr3g1936 660 SUPERFAMILY Protein kinase-like (PK-like) 324 631 IPR011009 -
Mtr3g1936 660 CDD STKc_IRAK 346 613 - -
Mtr3g1936 660 Gene3D Phosphorylase Kinase; domain 1 310 416 - -
Mtr3g1936 660 MobiDBLite consensus disorder prediction 635 660 - -
Mtr3g1936 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 657 - -
Mtr3g1936 660 Gene3D Transferase(Phosphotransferase) domain 1 417 624 - -
Mtr3g1936 660 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Mtr3g1936 660 SMART serkin_6 340 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1936 660 Pfam Protein tyrosine and serine/threonine kinase 343 610 IPR001245 GO:0004672|GO:0006468
Mtr3g1936 660 ProSiteProfiles Gnk2-homologous domain profile. 32 138 IPR002902 -
Mtr3g1936 660 ProSiteProfiles Gnk2-homologous domain profile. 144 250 IPR002902 -
Mtr3g1936 660 Pfam Salt stress response/antifungal 155 247 IPR002902 -
Mtr3g1936 660 Pfam Salt stress response/antifungal 55 135 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1936 Mtr-Chr3 32339359 32343784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1936 89 660 Receptor kinase-like Gene Family AT1G70520 38.014 5.29e-120 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g1936 PK_Tyr_Ser-Thr 8.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1936 - - gmx:100305452 847.04