Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1935 ATGATGCTGCAACTCAAGCTAGTGTTCATAACCTTGGTGTGTTGGAACATATTAATTAGTTATGATTGTGTACTTGGAGATTCACAAACAAGTATAGTATTAAACAGTTCATGTAGCACATTTAACGCATCAAACTTGCGTAGCTTCTATGCAAATATCAATGGAACATTTTTAGATTTGAAGAATCAAATTAGCAATGAAAGCAAACACTTTGCCACATCACAACAAGCCATAGGTGAGGTAATTGTATTTTCTATGTTTCAATGTAGAAATTACCTCTCCAAAAATGATTGTGTTGGTTGCTTCAACATTGCCTCTACCAAAATCCGTAGTTGCTCAGCTGCTAATGGAGCTAGAGTCATCTATGATGGCTGCTTCCTCAGGTACGAGAGTGAAAGATTCTACGATCAAACAACTCAACAAGGGAATGGTGTAATATGTGGGAACAAAACTGCAAAAGAAGGCACTGCATTTGGAACAATTGGACACAAAGTGCTAATGGATATCCAATTAGCAACACCTAAAATCAAAGGTTTTTTTGCAGCTACCAAGACACAGGTGACACCTGGTGGAAATAGTTCAGTTTATGCCGTTGCACAGTGTGCTGAAACAGTCACTGAAAGTGGTTGTTTAGCTTGTTTGGCAGTTGGATACAGTAACTTGCAAACTTGTCTTCCTAACAGTGATGGTAGAGCATATGATGCAGGGTGTTTTATGAGATATTCAGAGACACCCTTTTTTGCTGATAATCAGACCATTGATATCACAGCCTACTTAAAAGGAGGTTCAAGCAACAAATGGGCCATTATAGGTGGTGTTGTTGGAGGTGTAGTAGGTCTTGTTGTTATCATTCTTGCAATTTTAGGTTGGCGACAATACAGGAAACCTAAGAGGGCTCCTAGAGGCAACATATTAGGAGCAACTGACTTGAAAGGTCCAGTTAACTACAAGTATAGTGATTTAAAAGCTGCAACAAAAAACTTCAACGATGAAAATAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAATGTTGTAGCAGTTAAGAAACTAGTTTTGGGAAAATCAAGCAAGATAGACAATGATTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTTCATCATAGGAATCTTGTTAGACTTCTTGGCTGTTGCAGTAAAAGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAACAGCAGCCTAGACAAATTCTTGTTTGGTAACAAACAAGGTTCCCTCAATTGGAAACAAAGGTGTAACATAATTTTAGGCACAGCAAGGGGACTGGCCTATCTACATGAGGAATTCCACATTTCCATTATACATAGAGATATAAAGAGTAGCAATATCCTCCTTGATGATAATCTTCATCCCAAAATTGCTGATTTTGGATTGGCGCGGCTTTTGCCAGGGGATCGATCTCATCTAAGCACAGGAGTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAATTATCAGAAAAGGCTGATACCTACAGCTACGGAATTGTAGTCCTAGAAATCATAAGTGGTCAAAAGAGTACAGAAATGAAGGTTGACGATGATGGTGAATTCCTTCTTCAAAAGACATGGAAACTGCATGAGAGAGGCATGCACTTGGAGCTAGTCGACAAGGTCTTAGACCCTAACGACTATGATGGAGAAGAAGTGAAGAAAATGATAGAGATTGCTTTGTTGTGTACTCAAGCATCAGCTGGAATGAGACCAACGATGTCTGAAGTAGTAGTCCTCCTCCAAACCAGGAGCTTAGTGGAGCACCTGCAACCAACTATGCCTGTGTTTGTAGAAACGAATCTTAGGTCTCGTGAAGGCCACTCTACCTCAACTGGTTCTTCTACGTCTAATGCCACTGCCTCCTTTTCTCTATCAGCTCGATGA 1941 0.3977 MMLQLKLVFITLVCWNILISYDCVLGDSQTSIVLNSSCSTFNASNLRSFYANINGTFLDLKNQISNESKHFATSQQAIGEVIVFSMFQCRNYLSKNDCVGCFNIASTKIRSCSAANGARVIYDGCFLRYESERFYDQTTQQGNGVICGNKTAKEGTAFGTIGHKVLMDIQLATPKIKGFFAATKTQVTPGGNSSVYAVAQCAETVTESGCLACLAVGYSNLQTCLPNSDGRAYDAGCFMRYSETPFFADNQTIDITAYLKGGSSNKWAIIGGVVGGVVGLVVIILAILGWRQYRKPKRAPRGNILGATDLKGPVNYKYSDLKAATKNFNDENKLGEGGFGDVYKGTLKNGNVVAVKKLVLGKSSKIDNDFESEVKLISNVHHRNLVRLLGCCSKSQERILVYEYMANSSLDKFLFGNKQGSLNWKQRCNIILGTARGLAYLHEEFHISIIHRDIKSSNILLDDNLHPKIADFGLARLLPGDRSHLSTGVAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEMKVDDDGEFLLQKTWKLHERGMHLELVDKVLDPNDYDGEEVKKMIEIALLCTQASAGMRPTMSEVVVLLQTRSLVEHLQPTMPVFVETNLRSREGHSTSTGSSTSNATASFSLSAR* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1935 646 SUPERFAMILY Protein kinase-like (PK-like) 313 620 IPR011009 -
Mtr3g1935 646 ProSiteProfiles Protein kinase domain profile. 328 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1935 646 Pfam Salt stress response/antifungal 151 243 IPR002902 -
Mtr3g1935 646 Pfam Salt stress response/antifungal 42 131 IPR002902 -
Mtr3g1935 646 MobiDBLite consensus disorder prediction 622 646 - -
Mtr3g1935 646 Gene3D Phosphorylase Kinase; domain 1 301 404 - -
Mtr3g1935 646 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
Mtr3g1935 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Mtr3g1935 646 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 641 - -
Mtr3g1935 646 Pfam Protein tyrosine and serine/threonine kinase 331 597 IPR001245 GO:0004672|GO:0006468
Mtr3g1935 646 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Mtr3g1935 646 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 23 641 - -
Mtr3g1935 646 SMART serkin_6 328 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1935 646 Gene3D - 30 134 IPR038408 -
Mtr3g1935 646 Gene3D - 143 246 IPR038408 -
Mtr3g1935 646 CDD STKc_IRAK 334 600 - -
Mtr3g1935 646 Gene3D Transferase(Phosphotransferase) domain 1 405 610 - -
Mtr3g1935 646 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1935 Mtr-Chr3 32330117 32334504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1935 8 642 Receptor kinase-like Gene Family AT1G70520 35.901 3.76e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr3g1935 PK_Tyr_Ser-Thr 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1935 - - gmx:100801131 880.167