Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1896 ATGGCGAGTTTTCTGACTGATTTGGCGAAGCCTTATGTGGAGAAATTGATAAATGGGGCGATCATAGAGTCAAGTTATATATGTTGCTTCACATGCATTGCTAATGATTTTGAAGAAGAAAGAACAAGATTGGAAATAGAAAGCACAACTGTTAAGCAACGTGTTTATGATGCAATTAGAAGAGGAGACGATGTTCAAGTTAATGTTCGTTCATGGGAAAAAGAATCTGATGAGCTCATTCAAGAAGACACCAAAGCAAAACAAAAATGTCTTTTTGGGTTTTGTCCCCATATCATATGGCGATATAAAAGGGGAAAGGAACTGACAAATAAGAAGGAGAAAATGAAAATATTAATTGAAACTGGAAAGCAACTTTCAATTGAACTCCCTGCCCGTCTTCCAGATGTTGAACGTTATTCATCCCAACACTATATTCCTTTTAAAAGCAGGGAATCTAAATACAAAGAGCTTTTAGATGCTCTGAAAGATGACAACAATTATATAATCGGGTTGCAAGGGATGGGGGGAACAGGAAAAACTACATTGGCCAAAGAAGTTGGTAAGGAACTTAAGCAGTCCAAACAATTTAGTTACGTCATCGATACGACAGTGTCATTATCTCCTGATATCAGGAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTTGGTGACTGTAGTGAATCAGACCGACCCAAAAAACTATGGAGCAGATTAACCAATGAAGAGAAGATTCTTCTAATATTGGATGATGTGTGGGGAGATATTGATTTTAATGAAATTGGTATTCCATACAGTGACAATCACAAAGGCTGTATAGTTCTTGTAACCACACGCAGTCTCTCAGTGTGCAACAAATTAAGATGCAGTAAGACAATCCAACTGGAGCTCTTATCTGATGAAGAGGCATGGACCATGTTCCAAAGGCATGCTGGTCTAACAGAAATTTCAACTAAAAGTTTGCTTGACAAGGGCCGTAAAATTGCAAATGAATGCAAAGGGTTACCAATTGCAATTTCTGTTATCGCCAGTAGTTTGAAGGGCATACAACATCCGGAAGAGTGGGATGGGGCCTTAAAATCTTTGCAGAAACCCATGCACGGTGTTGATGATGAACTTGTTAAGATTTATAAATGCTTGCAAGTTAGCTATGATAATATGAAGAATGAGAAGGCCAAGAGACTATTGCTCCTGTGTTCTGTATTTCGAGAAGATGAAGAAATTCCTACCGAAAGGTTAACCAGACTTGGCATCGGAGGAGGCCTTTTTGGGGAAGATTATGTCAGCTACGATGATGCTCGAATTCAAGTTGTTATATCCAAAAATAAACTCCTAGATTCTTGTTTGTTGTTGGAGGCCGATCAAAGCGGAGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGATAGGGAACAAAGAGATTCAAACAGTGAAGTTGTATGATAAAAAACAAAAGGAAATGGTTGAAAGGGAGGCAAATATTAAATATTTGCTATGTGAAGGAAAGCTTAAGGATGTGTTTTCCTTTAAGCTTGATGGTTCCAAGCTTGAGATTCTAATTGTCACTGTGCTTAAGGATGAAGATTGTCACAATCTGAAAATCGAAGTCCTGAACTCATTTTTTGAAAATATTAAGGGCCTTCGAGTTTTTCATTTAATCCATGATGATCATTATTCTAGAGTAGCTCTATCATTACTTCGGCCAGTTCAGTTGATGAAAAATATTCGATCTCTTCTCTTTACATGTGTCAATTTGGGTGACATCTCTATTTTGGGAAACCTGCGAAGCCTTGAGACTCTTGATTTGAATTATTGTAAAATTGATGAGTTGCCTTATGAAATTACAAAACTAGAGAAATTTCGATTGTTGAGCTTGGAATATTGTGGAATTGCAAGGAATGACCCTTTTGAAGTGATTAAAGGATGCTCATCACTTGAAGAGTTGTATTTCATACAGAGTTTTAATTATTTTTGCCGAGAAATAACTTTCCCTGAATTGAAAAGGTTTTTTATCCACTCTATCTATTGGAGATCAAAGAATCAGTTGTCTTCAAGGCATGTTTCTCTTTTAGACAACACTTATGTTTTCCTATCTGAAACAACACTCAGGTATTGTATGCAAGAAGCTGAGATTCTAAGACTAAGAAGAATGGAGGGGGGATGGAGAAATATGATTCCTGAAATTGTTCCTATGGATTGTGGTATGAATGATCTAGTCGAGCTTACTTTGAGATGCATTTCACAACTACAATGCCTCATTGACACCAAACATATCGAATCTCAAGTATCAAAAGTCTTCTCCAAGTTGGCTGTACTAGAACTCGAAGGAATGGATAATTTGGAAGAATTGTTCAAAGGTCCTCTTTCCTTTGACTCTCTGAACAGTTTAGAGAATCTGTCCATTGAGAATTGTAAACGTTTGAAAATCTTATTCGAGTGCAACATAAACCTCTGCAATCTAAAGAGTCTTTCATTGGAACGATGCCCGATGTTGATCTCCATATTTCAACTGTCAACTGCTTGTAGCCTGATGTTGTTGGAGAGATTGGAAATATATGACTGTGAGGGTCTTGAATACATAATAGATGAAAGAAAATGGCAGGAATCGAGAAGTAAAATAGTTGATGATAATGATAACAAAAGTCATGGCTCAATGTTTCAGAAACTGAAAGTTCTTAGTATTAAGAAGTGTCCAAGAATTGAATTAATACTTCCGTTTCACTCTCCTCATGATCTTCCAGCACTAGAATCCATCACAATTGATAGTTGTAATAAGCTGAAATACATATTTGGCATAAATATGAAGCTTGATGGTTTACCAAATATGATTGACATTTTCCCTGAATGTTATGGTGTACATGAGAGGTCATCTTCCATTTCTGGATATGCTTCTAAGCCACAAACACAATCGGGTCCAATCAAACGCAATATCTTTTCATGGACTAATGTATATTGCTGTGGTAAAAAGTATGGGCACAAATTAAGGAGTAACACAAGTACTGAAATCTCATTGGTTTCCCAGGATCAACAACAGGACAACTTAATGGAATCAAATTCATATCCCCTTAACATATGGGAACGTGCTCAATGTCTTTCAAGACAATCACATATCTTGTGCAATGTTACAGAGATTACATTGAGCAATGTCTCAAAGATGAAATCGTTATTTAACCTATCTACTGCTCCAAGAATGTTATTGGAAACTTTGAATATTTGGAACTGTAATGAATGGAGGCACATTATAACAATAGACATTGGAGATCATCACGACAACACTGATGGCAATAACTGGGGCACTGTCTTCCCAAAATTAAGAAAGCTCTCTGTTTATAATTGCGCGCAATTGGAATATATAATTGGACACTACAACGATGATCATCAAAACAACACTAAGATTCATCTTCATCTTCCAGAATTGGAAGATCTCTATCTTGAGAATCTGCCAAGTTTAGTTGCCAATTACCCCAAACAATATCACACAACATTTCCACAATTGAAAAAACTTGTAGTTGAAGAATGCCCGCAATTTATTGGTGATTTCTTAACTCATCATTCAGTAACAAGATCTGTGGACGATACAATCATCAAGGAATCAAGTGGGAATATGGATAATTTTCTAGCTTTGGAGACACTCTTGGTAAATAATAACTCCAAAGTAAAAGATGTCTTTTGTCTGAATGAAATAAATGAACAACAACTGAGCTTAGCTTTGAAAGACATTGATTTGAATGTTTTGCCTATGATGACATTCCTTTTTGTGGGTCCCAAAAATTCATTTTTCCTCCAAAACCTTACCCATTTAAAGATCATGCGATGTGAAAAATTGAAAATTGTTTTCTCCACTTCTATAATAAGGTATCTGCCACAGTTGTTTACTTTGAGAATTGAAGAGTGCAATGAGTTGAAGCATATTATTGAAGATGATTTGGAGAATACAACAAAGACATGCTTCCCAAAACTAAGAATACTTGTTGTAGTAAAGTGCAACAAGTTGAAATATGTCTTTCCAATCTCCATATCTAAAGAGCTTCCAGAGCTAATTGTTCTGATCATAAGAGAAGCAGATGAGTTAGAGGAAATATTTGTAAGTGAAGGTGATGATCACAAAGTGGAGATTCCAAATCTAAAACTTGTAATATTTGAAAATCTACCAAGCCTCTATCATGCTCAGGGAATTCAATTTCAAGCTGTAAAACATCGTTTAATAATGAATTGTCAAAAACTCTCTCTGGCTTCAGCAATAATAACCACAGACCTTGAAAATGATCTTTCTGGTTTAGATAGTAACATCTACGGTTACATCTACGTTTTGGAATTCGTTGAGTATTTGAGGGATTTGTTTCAACAATTACAAACCGCCAAAGGTTTTGACGCTGGGTTTGAAGTTAAAGCATCATCAGAACACGAGTTAACTTCTCCAAAGGAAACAAAACAAACACCAGAGACAGAGCATGAACTTGTGGAAAATGTTCCTGATTTAGAAATACCAACAAATTCAAAAGAGTTGATGAATGAACAATCGATGGAGCAACAACGTCTACTTGGAGAAGCCGATTCTGCCGTCAAACCTTCTCAGGAATGTGGTGACTGCCAAATAGCCATACCTTCTCCTCCTATTGCCATAACAAATCCTCTTACCACTCAGGATGTTGATATTAACATCAATGATGATCAAGTTTCTGTAAATGATGATTCTGTCATAAAAGTAACCTCAATTGTTGAGGAACAACTATCTAAGGATGTTGAATTTAAAGTTCCAGAATCTAAACCATCTCCTCTCATTCCTTCACCTCAAGAATTTCAAACTCCTTCAATGCGATCAAAAGGAGACCCTTCTCAAAATGTAGAAGATTTAAGTTCTTCTTTGCTTGTCAAGAGTGAGCTTGAGCAACTAGTCTCCAAGAATTATTTGGATTGTGAGAACTTGTCTTTGTTGACTGTTTTCCTTGTTAAGAATCCTTCTGTTCATTTGAAGGACACTGCACTTAGTAATAGATACAAGGGTTGTGCCTACAATTTACTAGCTGAACTATTGAAATTCCTTGAAACCCATAGTATGTTGGAAGTATTGGGGTCGTGCCACTCTAAATTTGTGGAGTTAATACAAGATGCGCGCAGCTTTGGTTTTGATAAGGATTGGTTGGATGGTGTTGAGAGGCGCGCTTTGTTTCCTGAAATAAAAGTGTCCCAAGATGCCTTGCAAAATTTATTAGATTCCAAGCAACAGGTTACCAAGGATGTTGAAGTCTTGCGATTGAAGATAGGCATTTTAAGCGAACAAATGGAAGTTCTTAGTGAACAGGTGGAAGATCTTAAGCAACAATTGACATCCTCTGAAGCTGTTTTGGAGAGTATCATTCAACAAGAGGTAGTTTTACATGCCCCTATCGGCTATTAG 5409 0.3668 MASFLTDLAKPYVEKLINGAIIESSYICCFTCIANDFEEERTRLEIESTTVKQRVYDAIRRGDDVQVNVRSWEKESDELIQEDTKAKQKCLFGFCPHIIWRYKRGKELTNKKEKMKILIETGKQLSIELPARLPDVERYSSQHYIPFKSRESKYKELLDALKDDNNYIIGLQGMGGTGKTTLAKEVGKELKQSKQFSYVIDTTVSLSPDIRKIQDDIAGPLGLKFGDCSESDRPKKLWSRLTNEEKILLILDDVWGDIDFNEIGIPYSDNHKGCIVLVTTRSLSVCNKLRCSKTIQLELLSDEEAWTMFQRHAGLTEISTKSLLDKGRKIANECKGLPIAISVIASSLKGIQHPEEWDGALKSLQKPMHGVDDELVKIYKCLQVSYDNMKNEKAKRLLLLCSVFREDEEIPTERLTRLGIGGGLFGEDYVSYDDARIQVVISKNKLLDSCLLLEADQSGVKMHDLVRDAAQWIGNKEIQTVKLYDKKQKEMVEREANIKYLLCEGKLKDVFSFKLDGSKLEILIVTVLKDEDCHNLKIEVLNSFFENIKGLRVFHLIHDDHYSRVALSLLRPVQLMKNIRSLLFTCVNLGDISILGNLRSLETLDLNYCKIDELPYEITKLEKFRLLSLEYCGIARNDPFEVIKGCSSLEELYFIQSFNYFCREITFPELKRFFIHSIYWRSKNQLSSRHVSLLDNTYVFLSETTLRYCMQEAEILRLRRMEGGWRNMIPEIVPMDCGMNDLVELTLRCISQLQCLIDTKHIESQVSKVFSKLAVLELEGMDNLEELFKGPLSFDSLNSLENLSIENCKRLKILFECNINLCNLKSLSLERCPMLISIFQLSTACSLMLLERLEIYDCEGLEYIIDERKWQESRSKIVDDNDNKSHGSMFQKLKVLSIKKCPRIELILPFHSPHDLPALESITIDSCNKLKYIFGINMKLDGLPNMIDIFPECYGVHERSSSISGYASKPQTQSGPIKRNIFSWTNVYCCGKKYGHKLRSNTSTEISLVSQDQQQDNLMESNSYPLNIWERAQCLSRQSHILCNVTEITLSNVSKMKSLFNLSTAPRMLLETLNIWNCNEWRHIITIDIGDHHDNTDGNNWGTVFPKLRKLSVYNCAQLEYIIGHYNDDHQNNTKIHLHLPELEDLYLENLPSLVANYPKQYHTTFPQLKKLVVEECPQFIGDFLTHHSVTRSVDDTIIKESSGNMDNFLALETLLVNNNSKVKDVFCLNEINEQQLSLALKDIDLNVLPMMTFLFVGPKNSFFLQNLTHLKIMRCEKLKIVFSTSIIRYLPQLFTLRIEECNELKHIIEDDLENTTKTCFPKLRILVVVKCNKLKYVFPISISKELPELIVLIIREADELEEIFVSEGDDHKVEIPNLKLVIFENLPSLYHAQGIQFQAVKHRLIMNCQKLSLASAIITTDLENDLSGLDSNIYGYIYVLEFVEYLRDLFQQLQTAKGFDAGFEVKASSEHELTSPKETKQTPETEHELVENVPDLEIPTNSKELMNEQSMEQQRLLGEADSAVKPSQECGDCQIAIPSPPIAITNPLTTQDVDININDDQVSVNDDSVIKVTSIVEEQLSKDVEFKVPESKPSPLIPSPQEFQTPSMRSKGDPSQNVEDLSSSLLVKSELEQLVSKNYLDCENLSLLTVFLVKNPSVHLKDTALSNRYKGCAYNLLAELLKFLETHSMLEVLGSCHSKFVELIQDARSFGFDKDWLDGVERRALFPEIKVSQDALQNLLDSKQQVTKDVEVLRLKIGILSEQMEVLSEQVEDLKQQLTSSEAVLESIIQQEVVLHAPIGY* 1803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1896 1802 PRINTS Disease resistance protein signature 168 183 - -
Mtr3g1896 1802 PRINTS Disease resistance protein signature 241 255 - -
Mtr3g1896 1802 PRINTS Disease resistance protein signature 334 348 - -
Mtr3g1896 1802 PRINTS Disease resistance protein signature 596 612 - -
Mtr3g1896 1802 Gene3D Ribonuclease Inhibitor 700 844 IPR032675 -
Mtr3g1896 1802 Gene3D Ribonuclease Inhibitor 1164 1370 IPR032675 -
Mtr3g1896 1802 Gene3D Ribonuclease Inhibitor 845 945 IPR032675 -
Mtr3g1896 1802 SUPERFAMILY RNI-like 1209 1362 - -
Mtr3g1896 1802 Gene3D - 133 296 IPR027417 -
Mtr3g1896 1802 MobiDBLite consensus disorder prediction 1469 1488 - -
Mtr3g1896 1802 MobiDBLite consensus disorder prediction 1602 1617 - -
Mtr3g1896 1802 PANTHER - 57 952 - -
Mtr3g1896 1802 SUPERFAMILY RNI-like 1039 1230 - -
Mtr3g1896 1802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 401 IPR027417 -
Mtr3g1896 1802 Pfam NB-ARC domain 155 388 IPR002182 GO:0043531
Mtr3g1896 1802 MobiDBLite consensus disorder prediction 1588 1617 - -
Mtr3g1896 1802 Gene3D Ribonuclease Inhibitor 468 690 IPR032675 -
Mtr3g1896 1802 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 57 952 - -
Mtr3g1896 1802 Coils Coil 1737 1792 - -
Mtr3g1896 1802 SUPERFAMILY L domain-like 461 932 - -
Mtr3g1896 1802 Gene3D - 299 390 IPR042197 -
Mtr3g1896 1802 Coils Coil 34 54 - -
Mtr3g1896 1802 CDD AAA 154 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1896 Mtr-Chr3 31965890 31978445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1896 169 556 WRKY Transcription Factor Family AT5G45050 23.134 5.06e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1896 - - mtr:MTR_3g062420 2308.87