LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g1894	ATGGCGAGTTTTCTGACTGATTTGGCGAAGCCTTATGTGGAGAAATTGATAAATGGGGTGATCATAGAGTCAAGTTATATATGTTGCTTCACGTGCATTGCTGATGATTTTGAAGAAGAAAGAGCTAGATTGGAAATAGAAAGCACAACTGTTAAGCAACGTGTTGATGTTGCAACAAGAAGAGGAGAGGATGTTCAAGCTAATGCTCTTTTTTGGGAAAAAGAAGTTGATGAGCTCATTCAAGAAGACACCAAAACAAAACAAAAATGTCTTTTTGGATTTTGTCCCCATATCATATGGCGTTACAAAAGGGGAAAGGAACTGACAAATAAGAAGGAGCAGATTACAAGATTGATTCAAACTGGAAAGGAACTTCAAATTGGATTCCCTGCTCGTCTTCCAGATGTTGAACGCTATTCATCCCAACACTATATTCCTTTTAAAAGTAGGGAATCCAAATACAAAGAGCTTTTAGATGCTCTGAAAGATGACAACAATTTTATAACCGGGTTGCAAGGGATGGGGGGCACAGGAAAAACTACAATGTCCATAGAAGTGGGTAAGGAACTTAAGCAATCCAAACAATTTACCAGCGTCGTCGATACGACAGTGTCATTATCTCCTGATATTAGAAAGATTCAAAATGATATTGCTGGACAGTTGGAATTGAAATTTGATGACTGTACTGAATCAGACCGGCCCAAAAAACTATGGAAGAGATTAACCAATGGTGAAAAGATTCTTCTAATATTGGATGATGTGTGGGGAGATATTGATTTTAATGAAATTGGTATCCCATACAGTGACAACCACAAGGGCTGTAGAATTCTTGTAACCACGCGCAATCTCTTAGTGTGCAACAGATTAAGATGCAGTAAGACAATCCAACTGGAGCTCTTATCTGATGAAGAGGCATGGACCATGTTCCAAAGGCATGCTGGTCTAACAGAAATTTCAACTAAAAGTTTGCTTGACAAGGGCCGTAAAATTGCAAATGAATGCAAAGGGTTACCAATTGCAATTGCTGTTATCGCCAGTAGTTTGAAGGGCATACGACATCCGGAAGAGTGGGATCGAGCCTTAAAATCCTTGCAGACACCCATGCACGGTGCTGATGATGAGCTTGTTAAAATTTATAAACGCTTGAAAGTTAGCTATGATAATATGAAGAATGAGAACGCCAAGAGACTATTGCTCTTGTGTTCTGTATTTCGAGAAGATGAAGAAATTCCTACCGAAAGGTTAACCAGACTTGGCATCGGAGGAGGCCTTTTTGGGGAAGATTATGTCAGCTACGAAGATGCTCGAATTCAAGTTGTTATATCCAAAAATAAACTCCTAGATTCTTGTTTGTTGTTGGAGGCCGATCAAAGCGAAGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGATAGCGAACAAAGAGATTCAAACAGTGAAGTTGTATAATAAAAAACAAAAGGCAATGGTTGAAAGGGAGGCAAATATTAAATATTTGTTATGTGAAGGCAAGCTTAAGGATGTGTTTTCCTTTAAGATTGATGGTTCCAAGCTTGAGATTTTAATTGTCTCTATGCATAAGGATGAAGATTGTCACAATGTAGAAGTCGATGTTCTGAACTCGTTTTTTGAAAATATTAGGGGCCTTCGAGTTTTTCATTTAATCCATGATCATAGTTATTCTAGACTAGCTCTATCATTACTTCAGCCGGTTCAGATGATGAAAAATATTCGATCTCTTCTCTTTAAGCTTGTCAATTTGGGCGACATCTCTATTTTGGGAAACCTGCGAAGCCTTGAGACTCTTGATTTGAGTTATTGTAAAATTGATGAATTGCCTCATGAAATTAGAAAACTAGAGAAATTTCGATTGTTGAACTTGGAATATTGTGAAATTGCGAGGAATGATCCTTTTGAAGTGATTAAAGGATGCTCATCACTTGAAAAGTTGTATTTCATATTCAGTTTTAATACTTTTTGTCGAGAAATAACTTTTCCTGAATTGAAAAGGTTTTTTATCGACTCTAGCTATTGGAGATCAAAGAATGATTTGTCATCAAGGTATGTGTCTCTTGTAGTCAACACTCCTGATGTTTTCCTATGTGAAACAACACTCAAGTATTGTATGCAAGAAGCAGAGGTTCTTAGACTAAGAAGGATGGAGGGGGGATGGAGAAATATGATGCCTGAGATTGTTCCTATGGACCATGGTATGAATGATCTAGTCGAGCTTAGTTTGAGTAGTATTTCACAACTACAATGCCTCATTGACACTAAACATACTGAATCTCTAGTATCAAAAGTATTCTCCAAGTTGGTTGTACTAGAGCTCGAAGGAATGGATAATTTGGAAGAATTGTTCAGCGGTCCTCTTTCCTTTGACTCTCTGAACAGTTTAGAGAATCTGTCCATTGATGATTGTAAACATTTGAAAAGCTTATTTAAGGGCAACCTAAACCTATTCAATCTGAAGAGTGTGTCGTTGAAAGAATGCCCGATGTTGATCTCCCTATTTCAACTGTCAACTGCCTGTAGCCTAATGTTGTTGGAGACGCTGGAAATAAATGACTGCGGATGTCTTGAATTCATAATAGATGAAAGAAAAGGGGAGGAATCGAGCGGTGAAATAGTTGATGATAATGATAACACAAGTCATGGCTCAATGTTTCAGAAACTGAAAGTTCTTAGTATTGACAATTGTCCAAGAATAGAATTAATAATTCCGCTTCTCTCTGCTTGTGATCTTCCAGCTCTAGAATCCATCACAATAGGAAGTTGTGATAAGCTGAAATACATATTTGGCAAAGATGTCAAACTTAGTTCCCTCGTAAAGATGGAGCTTGACGGTTTACCAAATATGATTGACATTTTCCCTGAATGTTATGGTGCCACGACTTCACCTATTAAGAGTTCATCTTCCATTTCTAGATATGCTTCTAAGCCACCAACACAGTCGGGTCCAATCAAACGCAATATCTTTTCATGGACTAATGTTTGTTGTTGTGGTAAAAAATATGGGCACAAATTAAGGAGTAACACAAGTACTGAAATCTCATTGGTTTCCCAGGATCAACAACATGACAACTTAATGGAATCAAATTCATATCCCCTTAACATATGGGAATGTGCTCAATGTCTTTCAAGACAATCACATATCTTGTGCAATGTTACAGAGATTACATTGAGCAATGTCTCAAAGATGAAATCGTTATTTAACCTATCTACTGCTCCAAGAATGTTATTGGAAACTTTGAATATTTGGAACTGTAATGAATGGAGGCACATTATAACAATAGACACTGGAGATCATCATGACAACCCTGATGGCAATAACTGGGGCACTGTCTTCCCAAAATTAAGAAAGCTCGTTGTTTATAATTGCGCGCAATTGGAATATATAATTGGACACTACAACGATGGTCATCAAAACAACACTAAGATTCATCTTCATCTTCCAGCATTGGAAGATCTCTATCTTGAGAATCTGCCAAGTTTAGTTGCCAATTACCCCAAACAATATCACACAACATTTCCACAATTGAAAAAACTTGTAGTTGAAGAATGCCCGCAATTTATTGGTGATTTCTTAACTCATCATTCAGTAACAAGATCTGTGGACGATACAATCATCAAGGTATTCATCCTTATTTCTATATATCTTTGTTGTTTGTAA	3678	0.3736	MASFLTDLAKPYVEKLINGVIIESSYICCFTCIADDFEEERARLEIESTTVKQRVDVATRRGEDVQANALFWEKEVDELIQEDTKTKQKCLFGFCPHIIWRYKRGKELTNKKEQITRLIQTGKELQIGFPARLPDVERYSSQHYIPFKSRESKYKELLDALKDDNNFITGLQGMGGTGKTTMSIEVGKELKQSKQFTSVVDTTVSLSPDIRKIQNDIAGQLELKFDDCTESDRPKKLWKRLTNGEKILLILDDVWGDIDFNEIGIPYSDNHKGCRILVTTRNLLVCNRLRCSKTIQLELLSDEEAWTMFQRHAGLTEISTKSLLDKGRKIANECKGLPIAIAVIASSLKGIRHPEEWDRALKSLQTPMHGADDELVKIYKRLKVSYDNMKNENAKRLLLLCSVFREDEEIPTERLTRLGIGGGLFGEDYVSYEDARIQVVISKNKLLDSCLLLEADQSEVKMHDLVRDAAQWIANKEIQTVKLYNKKQKAMVEREANIKYLLCEGKLKDVFSFKIDGSKLEILIVSMHKDEDCHNVEVDVLNSFFENIRGLRVFHLIHDHSYSRLALSLLQPVQMMKNIRSLLFKLVNLGDISILGNLRSLETLDLSYCKIDELPHEIRKLEKFRLLNLEYCEIARNDPFEVIKGCSSLEKLYFIFSFNTFCREITFPELKRFFIDSSYWRSKNDLSSRYVSLVVNTPDVFLCETTLKYCMQEAEVLRLRRMEGGWRNMMPEIVPMDHGMNDLVELSLSSISQLQCLIDTKHTESLVSKVFSKLVVLELEGMDNLEELFSGPLSFDSLNSLENLSIDDCKHLKSLFKGNLNLFNLKSVSLKECPMLISLFQLSTACSLMLLETLEINDCGCLEFIIDERKGEESSGEIVDDNDNTSHGSMFQKLKVLSIDNCPRIELIIPLLSACDLPALESITIGSCDKLKYIFGKDVKLSSLVKMELDGLPNMIDIFPECYGATTSPIKSSSSISRYASKPPTQSGPIKRNIFSWTNVCCCGKKYGHKLRSNTSTEISLVSQDQQHDNLMESNSYPLNIWECAQCLSRQSHILCNVTEITLSNVSKMKSLFNLSTAPRMLLETLNIWNCNEWRHIITIDTGDHHDNPDGNNWGTVFPKLRKLVVYNCAQLEYIIGHYNDGHQNNTKIHLHLPALEDLYLENLPSLVANYPKQYHTTFPQLKKLVVEECPQFIGDFLTHHSVTRSVDDTIIKVFILISIYLCCL*	1226

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr3g1894	1225	PANTHER	-	56	961	-	-
	Mtr3g1894	1225	PANTHER	-	1039	1139	-	-
	Mtr3g1894	1225	Gene3D	Ribonuclease Inhibitor	713	971	IPR032675	-
	Mtr3g1894	1225	Gene3D	-	134	296	IPR027417	-
	Mtr3g1894	1225	Gene3D	Ribonuclease Inhibitor	1027	1203	IPR032675	-
	Mtr3g1894	1225	Gene3D	-	299	385	IPR042197	-
	Mtr3g1894	1225	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	142	401	IPR027417	-
	Mtr3g1894	1225	Gene3D	Ribonuclease Inhibitor	470	674	IPR032675	-
	Mtr3g1894	1225	Gene3D	-	386	469	IPR036388	-
	Mtr3g1894	1225	PANTHER	AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED	1039	1139	-	-
	Mtr3g1894	1225	PANTHER	AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED	56	961	-	-
	Mtr3g1894	1225	PRINTS	Disease resistance protein signature	168	183	-	-
	Mtr3g1894	1225	PRINTS	Disease resistance protein signature	241	255	-	-
	Mtr3g1894	1225	PRINTS	Disease resistance protein signature	334	348	-	-
	Mtr3g1894	1225	PRINTS	Disease resistance protein signature	596	612	-	-
	Mtr3g1894	1225	ProSiteProfiles	Leucine-rich repeat profile.	600	621	IPR001611	GO:0005515
	Mtr3g1894	1225	SUPERFAMILY	L domain-like	461	1191	-	-
	Mtr3g1894	1225	Pfam	NB-ARC domain	155	388	IPR002182	GO:0043531
	Mtr3g1894	1225	Coils	Coil	34	54	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr3g1894	Mtr-Chr3	31939140	31944140	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr3g1894	169	556	WRKY Transcription Factor Family	AT5G45050	21.914	3.37e-12	69.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g1894	-		-	mtr:MTR_3g062420	1776.53