Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1881 ATGGGAAGAAGACCAGCGAGATGTTACCGGCAAATTAAGAACAAACCATACCCTAAGTCACGATTCTGTCGCGGTGTACCAGATCCAAAGATCCGAATCTATGATGTAGGTGCGAAGAAAAAAGGCGTAGATGAGTTCCCATTTTGCGTCCACTTAGTATCGTGGGAGAAAGAGAATGTCTCTAGCGAAGCATTAGAGGCAGCTAGAATCGCGTGCAACAAGTACATGTCAAAATTTGCTGGAAAAGACACGTTTCATTTGCGTGTGAGGGTTCATCCTTTCCATGTGTTGAGGATTAATAAGATGCTCTCGTGTGCTGGGGCGGATAGGTTGCAGACGGGGATGAGAGGTGCGTTTGGGAAACCGTTAGGGACTTGTGCTAGGGTTAGTATTGGTCAGGTGCTGTTGTCTGTTAGATGTAAGAGTGGGAATGGTGATCATGCTCAAGAGGCTCTTCGTCGTGCTAAGTTTAAGTTCCCTGGGCGTCAGAAGATTATTGTTAGTAGAAAGTGGGGATTTACAAAGTTGAGTCATGCTGAGTACTTGAAGTTGAAATCTGAGAACAGAATTGTGCCGGATGGCGTAAATGCAAAGGTTCTTGGGTGCCATGGACCTTTGGCCAATCGTCAGCCTGGAAGAGCTTTCTTGCCTGCTTAG 657 0.4627 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGAKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMSKFAGKDTFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTCARVSIGQVLLSVRCKSGNGDHAQEALRRAKFKFPGRQKIIVSRKWGFTKLSHAEYLKLKSENRIVPDGVNAKVLGCHGPLANRQPGRAFLPA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1881 218 Pfam Ribosomal protein L16p/L10e 12 166 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mtr3g1881 218 ProSitePatterns Ribosomal protein L10e signature. 108 129 IPR018255 GO:0003735|GO:0005840|GO:0006412
Mtr3g1881 218 CDD Ribosomal_L16_L10e 41 166 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mtr3g1881 218 Gene3D Ribosomal protein L10e/L16 1 215 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mtr3g1881 218 PANTHER 60S RIBOSOMAL PROTEIN L10-LIKE 1 217 - -
Mtr3g1881 218 TIGRFAM uL16_euk_arch: ribosomal protein uL16 1 174 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mtr3g1881 218 PIRSF RPL10a_RPL10e 1 182 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mtr3g1881 218 SUPERFAMILY Ribosomal protein L16p/L10e 4 173 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mtr3g1881 218 PANTHER 60S RIBOSOMAL PROTEIN L10 1 217 IPR001197 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1881 Mtr-Chr3 31740491 31742110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1881 1 218 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 87.156 2.87e-142 394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1881 3 31740491 31742110 Mtr3g1881 3 31740491 31742110 ECH