Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1876 ATGCAAAGACTTGATTTTGAGTTCTCACAATTTTTTCAGGAAAATATGAAGACCAACAAAGTTCACTCTAAATTTATGTCCATGAAGTTCTATTCTGCTTCAGCAGCTTCTTTCCTTTTAGTCATAGCAATTATTTTCCCTCTTGCTATTGCCGATCTTAATTCCGATAAGCAAGCCCTTCTTGATTTTATCAATGTTGTGCCGCACCGTAAAAACTTGATGTGGAATCCATCCACCTCAATCTGTACATCTTGGGTTGGTATCACTTGCAATCAAGATGGAACTCGAGTTGTTAATGTCCGGCTCCCTGGAGTTGGACTAATTGGCTCCATCCCATCAAATACACTCGGAAAGCTTGATGCTGTGAAAATTATTAGCCTTCGCTCCAACCTACTTGGTGGAAATCTACCTGCTGACATTGCTTCTCTTCCGTCTCTTCAGTATCTCTACCTCCAACATAATAACTTTTCCGGTGATATTCCTACCTCGTTGTCACCTCAACTAATTGTACTTGATTTGTCTTATAATTCTTTCGCCGGCAGAATTCCAAAGACATTACAAAATTTGACAGAACTAAATAGTTTGAATCTCCAGAACAACTCCCTATCTGGAAGTATACCTAATCTCAATGTTACTAAGCTCGGTCATTTGAATTTAAGCTACAACAATTTGAGTGGACCTATCCCTTCAGCCCTTCAAGTTTATCCTAATTCGTCGTTTGAAGGAAACTATCATTTATGTGGACCGCCTCTAAAGCCGTGCTCTACGATTCCACCTCCTCCTGCCCTGACTCCTACTCCATCATCCGCACCTGGAAAACAAAGCTCCAAAAGTAAATTGAGTAAGGTAGCTATCATAGCCATTGCGGTTGGAGGAGCTGTATTGCTATTTTTCATAGTTCTTGTTATTGTTCTTTGCTGTTTGAAGAAAGAAGATGACGGTGGTTCAAGAGAAGTTAAAAGGAAGGGTCCTAGTGGCGGCGGCGGCGGTGGTGGTAGGGGTGAGAAGCCGAAAGAAGAGTTTGGGAGTGGAGTGCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAAGGAAGTTCTTATAATTTTGATCTTGAAGACTTGCTTAGAGCTTCAGCAGAAGTTCTGGGGAAAGGTAGCTATGGTACCTCGTATAAGGCTATATTGGAGGAGGCCATGACAGTTGTGGTGAAAAGGTTGAAAGAAGTTGTGGTTGGAAAAAAGGAGTTTGATCAGCAGATGGAGATTATGGGAAGGGTTGGACAACATGCAAACGTTTTGCCGCTTCGTGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTATGTTCCTGCTGGCAACCTTTCTACACTCTTGCATGGCAATCGAACAGGTGGAAGAACTCCATTAGATTGGGACTCGAGAGTAAAAATATCTCTCGGAACTGCAAGAGGAATGGCCCACATCCATTCTGTCGGCGGTCCCAAATTCACACATGGAAATATCAAGTCCTCAAATGTCCTCCTCAACCAAGATAACGACGGCTGCATTTCTGATTTCGGCCTAGCCTCACTTATGAATGTTCCTGCAAACCCTTCTAGAGCTGCAGGTTATCGCGCTCCTGAGGTGATTGAAACCCGTAAGCACTCACATAAATCAGATGTCTACAGCTTTGGTGTCCTCCTTCTCGAGATGCTTACAGGGAAAGCACCTCTCCAATCTCCTGGACGCGACGATATGGTTGATCTCCCCAGGTGGGTTCAGTCCGTCGTTCGGGAGGAGTGGACAGCCGAGGTTTTTGATGTAGAGCTAATGAGGTACCAAAACATTGAAGAGGAAATGGTGCAAATGTTGCAAATTGCCATGGCTTGTGTAGCAAAGATGCCTGATATGAGACCTAACATGGATGAAGTGGTGAAAATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGTCCATCTTCTGAAGAGAATAAATCTAAGGACTCAAATGTTCAAACTCCATAA 1998 0.4294 MQRLDFEFSQFFQENMKTNKVHSKFMSMKFYSASAASFLLVIAIIFPLAIADLNSDKQALLDFINVVPHRKNLMWNPSTSICTSWVGITCNQDGTRVVNVRLPGVGLIGSIPSNTLGKLDAVKIISLRSNLLGGNLPADIASLPSLQYLYLQHNNFSGDIPTSLSPQLIVLDLSYNSFAGRIPKTLQNLTELNSLNLQNNSLSGSIPNLNVTKLGHLNLSYNNLSGPIPSALQVYPNSSFEGNYHLCGPPLKPCSTIPPPPALTPTPSSAPGKQSSKSKLSKVAIIAIAVGGAVLLFFIVLVIVLCCLKKEDDGGSREVKRKGPSGGGGGGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTSYKAILEEAMTVVVKRLKEVVVGKKEFDQQMEIMGRVGQHANVLPLRAYYYSKDEKLLVYDYVPAGNLSTLLHGNRTGGRTPLDWDSRVKISLGTARGMAHIHSVGGPKFTHGNIKSSNVLLNQDNDGCISDFGLASLMNVPANPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPNMDEVVKMIEEIRQSDSENRPSSEENKSKDSNVQTP* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1876 665 CDD STKc_IRAK 376 641 - -
Mtr3g1876 665 ProSiteProfiles Protein kinase domain profile. 370 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1876 665 Gene3D Ribonuclease Inhibitor 53 209 IPR032675 -
Mtr3g1876 665 Pfam Leucine Rich Repeat 214 233 IPR001611 GO:0005515
Mtr3g1876 665 Pfam Leucine Rich Repeat 168 189 IPR001611 GO:0005515
Mtr3g1876 665 Pfam Leucine rich repeat N-terminal domain 54 91 IPR013210 -
Mtr3g1876 665 SUPERFAMILY L domain-like 55 253 - -
Mtr3g1876 665 Pfam Protein kinase domain 373 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1876 665 MobiDBLite consensus disorder prediction 639 656 - -
Mtr3g1876 665 Pfam Leucine rich repeat 108 156 IPR001611 GO:0005515
Mtr3g1876 665 MobiDBLite consensus disorder prediction 639 665 - -
Mtr3g1876 665 Gene3D Ribonuclease Inhibitor 210 255 IPR032675 -
Mtr3g1876 665 ProSiteProfiles Leucine-rich repeat profile. 191 213 IPR001611 GO:0005515
Mtr3g1876 665 MobiDBLite consensus disorder prediction 314 345 - -
Mtr3g1876 665 Gene3D Phosphorylase Kinase; domain 1 338 445 - -
Mtr3g1876 665 SUPERFAMILY Protein kinase-like (PK-like) 374 648 IPR011009 -
Mtr3g1876 665 PANTHER OS05G0588300 PROTEIN 19 665 - -
Mtr3g1876 665 PANTHER LRR RECEPTOR-LIKE KINASE 19 665 - -
Mtr3g1876 665 Gene3D Transferase(Phosphotransferase) domain 1 446 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1876 Mtr-Chr3 31669925 31674437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1876 27 663 Receptor kinase-like Gene Family AT5G58300 66.925 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr3g1876 Pkinase 3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1876 - - gmx:100796171 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1876 3 31669925 31674437 Mtr3g1876 3 31669925 31674437 ECH
Mtr3g1876 3 31669925 31674437 Mtr5g2560 5 33463565 33467602 PCT