Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1872 ATGGCAAGTTTTTTGACTGATTTGGCGAAGCCTTATGTGGATAAATTGATAAATGGGGTGATCGCAGAGTCAAGTTATATATGTTGCTTCACGTACATTGCTAAGGATTTTGAAGAAGAAAGAGTTAGTTTGGAAATAGAAAAGACAACTGTCAAGCAACGTGTTGATGTGGCAACCAGTAGAGGAGAAGATGTTCAAGCTAATGCTCTTTCTTGGGAAGAAGAAGCCGATAAGCTTATTCAAGAAGACACAAGAACAAAACAAAAATGTTTTTTTGGATTTTGTTCTCATTGCGTATGGAGATATAGAAGGGGAAAGGAATTGACAAATAAGAAGGAGCAAATTAAAAGATTAATTGAAACTGGAAAGGAACTTTCAATTGGACTCCCTGCTCGTCTTCCAGGTGTTGAACGTTATTCATCCCAACACTATATTCCTTTTAAAAGTAGGGAATCCAAATACAAAGAGCTTTTGGATGCATTGAAAGATGACAACAATTATGTAATCGGGTTGAAAGGAATGGGGGGCACAGGAAAAACTACATTGGCCAAAGAAGTTGGTAAGGAACTTAAGCAGTCCAAACAATTTACTCAAATAATTGACACGACAGTGTCATTTTCTCCTGATATCAAAAACATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTTGATGACTGTAATGAATCAGACAGACCCAAAAAACTATGGAGCAGGTTAACCAATGGTGAAAAGATTCTTCTAATATTGGATGATGTGTGGGGAGACATCGATTTTAATGAAATAGGGATTCCATACAGTGACAATCACAAAGGCTGTAGAATTCTTGTAACCACGCGCAATCTCTTGGTGTGTAACAGATTAGGATGCAGTAAGACAATGCAACTCGATCTGTTATCTGAAGAAGACGCATGGATCATGTTCAAAAGGCATGCTGGTCTTAGCGAAATTTCAACTAAAAATCTGCTTGAAAAAGGGCGTAAAATTGCAAATGAATGCAAAAGGTTACCGATTGCAATTGCTGCTATCGCCAGCAGTTTGAAGGGCATACAACGTCCGGAAGAGTGGGAATGGGCCTTAAAATCCTTGCAGAAAAATATGCAAATGCACAATGTTGATGATGAACTGGTTAAAATTTATAAATGCTTAAAATTTAGCTATGATAATATGAAGAATGAGAAGGCCAAGAGACTATTCCTCTTGTGTTCTGTATTTCGAGAAGATGAAAAAATTCCTACCGAAAGGTTAACCAGACTTAGCATCGGAGGAGGCCTTTTTGGGGAGGATTATGTCAGCTACGAAGATGCTCGAAGCCAAGTTGTTATATCCAAAAATAAACTCCTAGATTCTTGTTTATTGTTGGAGGCCAAAAAAAGTAGAGTGCAAATGCATGACATGGTTCGTGATGCAGCCCAATGGATAGCGAGCAAAGAGATTCAAACAATGAAGTTGTATGATAAAAATCAAAAGGCAATGGTTGAAAGGGAGAAAAATATTAAATATTTGTTATGTGAAGGCAAGCTTGAGGATGTGTTTTCATGTATGCTTGATGGTTCCAAGCTTGAGATTCTAATTGTCACTGGGCATAAGAAGGAAGGCTTCCACTGCCACGATTTGAAAATCGATGTCCCGAATTCATTTTTTGAAAATAGTACGGGCCTTCGAGTTTTTTATCTAATCTATGATAAGTATTCTAGTCTATCTCTATCATTACCTCATTCAATTCAGTCGTTGAAGAATATTCGATCTCTTCTCTTTGCAAATGTCATTTTGGGTGACATCTCTATTTTGGGAAACCTTCAAAGTCTAGAGACACTTGATTTGGATGGTTGTAAAATTGATGAATTGCCTCATGGAATCACAAAACTAGAGAAACTGAAATTATTGAACTTGACATCTTGTAGAATTGCAAGGAATAATCCTTTTGAAGTGATTGAAGGATGCTCGTCACTTGAAGAGTTGTATTTCATAGGTAGTTTTAATGATTTTTGCCGAGAAATAACTTTCCCGAAATTGCAAAGGTTTGATATTGGTGAATTTTCAAACTTAGTGGATAAATCATCATTGAAGGGGGTGTCTGATCTTGTAATCTCAGATAATGTTTTCCTATCTGAAACAACACTCAAGTATTGTATGCAAGAAGCAGAGGTTCTTGAACTAGGAAGAATCGAGGGGGGGTGGAGAAACATCGTACCTGAGATTGTTCCTCTGGATCATGGTATGAATGATCTAATCGAGCTTGGTTTGAGATCCATTTCACAATTACAGTGCCTCATTGACACTAATTCTCCAGTTTCAAAAGTCTTCTCCAAGTTGGTTGTACTAAAGCTCAAAGGAATGGATAATTTAGAAGAATTGTTCAATGGTCCTGTTTCCTTTGACTCTCTGAACAGTTTAGAGAAGCTGTCCATCAATGAATGTAAACATTTAAAAAGCTTATTTAAGTGCAACCTAAACCTCTGCAATCTAAAGAGTCTTTCATTGGAAGAATGCCCGATGTTGATATCCCTATTTCAACTGTCAACTGTTGTTAGCCTAGTGTTGTTGGAGAAACTGGAAATAATTGATTGTGAGCGCCTTGAAAACATAATAATAGTTGAAAAAAACGGGGACGAATTGAGAGGTGAAATAATTGATGCTAATGGCAATACAAGTCATGGCTCAATGTTTCCGAAACTAAAAGTTCTTATTGTTGAGAGCTGTCCGAGAATTGAATTAATACTTCCGTTTCTCTCTACTCATGATCTTCCAGCACTAAAATCCATCAAAATAGAAGATTGTGACAAGTTGAAATACATATTTGGTCAAGATGTCAAACTTGGTTCGCTCAAAAAATTGGAGCTTGATGGCATTCCGAATTTGATCGACATTTTCCCAGAATGTAATCCTACAATGTCTTTGTCCATTAAGAAGCCATCTTCCATTTCTGAGTCACAAGAACAATCAGAGCCAATCAAATGCAATATGTTTTCATGGACTGATATCTATTGTTGTGGTAAAAAATATGGGCACAACAAATTGAGGAGTACCACAATTACGAAAATCCCATTGGTTTCTCAGGATCAACTGCTGGATAACTTAATGGAATCAAATTCATATCCTCTTAACATATGGGAAAGTGCTCAATGTCTTTCAAGACAATCACATATCTTGTGCAATATTAAAAAGATTACACTCTGGAAAATTTCAAAGATGAAATCAGTATTTATCCTGTCTATTGCTCCAACAATGTTGTTGGAGTCATTGACAATCTATAAGTGTAATGAATTGAAGCACATTATAATAGACATGGGAGATCATGACAACACTGGTGGCAATAACTGGGGCACTGTCTTCCCAAAATTAAGATTGTTCGAAGTTGAACATTGTGAGAAATTGGAATACATAATTGGACACTTCACTGATGATCATCAAAACCACACTGAGATTCCTCTTCATCTTCCAGCATTGGAGACCTTCGTTCTTCACAATCTGCCAAGTTTAGTCAGCATGTGTCCCAAACAATATCACACGACATTTCCACAATTGGAAAGACTTGTAGTTGAAGAATGCCCGCAGTTTATTGGTGATTTCATAACTCATCATTCAATAACAAGATCGGTGGACGGTACAATCATCAAGGAATTGAGTGGGAATGTCGAACATTTTTGTGCTTTGGAAAGTCTCGAGGTAGATCACTCCAATGTAGAAAGTATCTTTCGTGTCGATGAAATAAATGAACGGCAAATGAACTTAGCTTTGGAAGACATTGATTTGGATGTTCTGCCTATGATGACATGCCTTTTTGTGGGTCCCAACAATTCGTTCTCCCTCCAAAACCTTACAAGAATAAAAATCAAGGGATGTGAAAAGTTGAAAATTGTTTTCACCACTTCTGTAATAAGGTGTCTACCACAGTTGTATTATATGAGAATTGAAGAGTGCAATGAGTTGAAGCATATCATTGAAGATGATTTGGAGAATAAAAATTCCTCAAATTTTATGTCTACAACAAAGACATTCTTCCCAAAGCTAGAAAAAGTTGTTGTAGAAAAGTGCAACAAGTTGAAATATGTGTTTCCAATCTCCATATGTAAAGAGCTTCCTGAGCTAAATGTTCTGATGATAAGAGAAGCAGATGAGCTGGAGGAAATATTTGTAAGTGAAGGTGATGATCACAAAGTGGAGATTCCAAATCTAGAATGTGTAGTATTTGAAAATCTACCAAGCCTCAGTCATGCCCAGAGAATTCAATTTCAAGCTGTAAAAAATCGTTTCATACGGAATTGTCAAAAACTCTCTCTGGAATCAACAAAAATACATGACTTGTCTGCTTCATATTTTCGCATCGATCCTGAATTGTGTAGGTATTTCAAGACTCGGTTTCGACAACAATTTCAAAAAGAGACCAAAGGCAACAATAGTGGTAATGAAAATCCAGAAACCTCTAAAAAAATTGCTGTTGGGGTTGAAGTTAAAGCATCATCAGAACATGAGCTGACTTCTCCAAAGAAAAAAACAAAACAAACACCAGAGACAGAGCATGAACTTGTGGAAAATGTTCCTGATTTAGAAATACCAACAAATTCAAAAGAGTTGATGAATGAACAATCAATGGAGCAGCAACGTCTACTTGGAGAACCTGATACTACCGTCAAACCTTCTCAGTTGGAGGTGTCTACCATTTCAGAAACAAAGAATGTAGCAGAAACGTGTTCCACCAATTCACCAACAAAGAATGAGTCACCTATACAAGTTAGCGAAATAAGTGTTCAAGAAGGAACTACTTCATCTAATGCCAAGAGAAGAACGACATCATCACAGGAATATAGTGACGGCGAAATGGCCATATCTTCTCCTCCAATTTCCATGACAAGGCATTTTTCCACTCAAGACATTCATGTTAATAACTTGCAGGAAACTAGTAACACTGATGATGATCAAGTTTCTCTAAATGATGATGCTGTTATAAAAGTAACCTCAATTGTTGAGGAACCATTTTCTAAGGATGTTGAATTTAAAGTTCCAGAATCTAAGCTATCCCTTATCATTACTTCGCCTCAACAATTTCGGACTCCTTCAATGCTTTCCAAAGGGGACCCTTCTCAACCAGATGAAGAATTAGAAGATCTTGATGACCAAATGGACATGACTTCTTTTTCCATTGCTACTACAGAGACCAATGATGAAGTTTCTCGGAATGATGATGCTTTCAAGAAAGTAAGCTCAAATATTGAGGAACAATTTCCTAAGATTGATGATATAATAGTAGTTTCCAAATCTAAACCCTCTCCTTGGATCACGTCTTCTGTTGCATCTCAGAAACCTCCGGTGCCTTCTAAAGGGGACCCTTCTCAAAAAGTAGAAGATTTCAGTTCTTCTTTGCTTGTCAAGCATTTTGATTATGAAAACTTGTCTTTGTTGACTGATTTCTTTGTTAAGCATCCTTCGGTTCTTTTAAACGACACTTCATTGAGTAACAGATACAAGGGTTATGCCTACAACTGCCTAGCTGAGCTATTGAAATTCCTCCAAACTCATAGTGTGTTGGATGTGTTAGGTTCAAGCCACTCTGAATTTGTTGAGTTATTACAAGATGTGCGCAAATTTGGTTTTGATAAGGAATGGTTGGATGATATTGAAAAACGCGCTTTGTTGCCTGGTTTACAAGTCTCTCAAGATGCATTGCAAAAATTGTTGGACTCAAAACACATTTTGACACAACATGTGGAGGATCTTAAGCATCAATTGGCTTCCTGTGAAGCTGTTTTGCAGAACATCACTCAACAGGAGGCACAAATTTTACATACTCGGGCTGCTTTAAGTGATCCTATTGGCTATTAG 5826 0.3706 MASFLTDLAKPYVDKLINGVIAESSYICCFTYIAKDFEEERVSLEIEKTTVKQRVDVATSRGEDVQANALSWEEEADKLIQEDTRTKQKCFFGFCSHCVWRYRRGKELTNKKEQIKRLIETGKELSIGLPARLPGVERYSSQHYIPFKSRESKYKELLDALKDDNNYVIGLKGMGGTGKTTLAKEVGKELKQSKQFTQIIDTTVSFSPDIKNIQDDIAGPLGLKFDDCNESDRPKKLWSRLTNGEKILLILDDVWGDIDFNEIGIPYSDNHKGCRILVTTRNLLVCNRLGCSKTMQLDLLSEEDAWIMFKRHAGLSEISTKNLLEKGRKIANECKRLPIAIAAIASSLKGIQRPEEWEWALKSLQKNMQMHNVDDELVKIYKCLKFSYDNMKNEKAKRLFLLCSVFREDEKIPTERLTRLSIGGGLFGEDYVSYEDARSQVVISKNKLLDSCLLLEAKKSRVQMHDMVRDAAQWIASKEIQTMKLYDKNQKAMVEREKNIKYLLCEGKLEDVFSCMLDGSKLEILIVTGHKKEGFHCHDLKIDVPNSFFENSTGLRVFYLIYDKYSSLSLSLPHSIQSLKNIRSLLFANVILGDISILGNLQSLETLDLDGCKIDELPHGITKLEKLKLLNLTSCRIARNNPFEVIEGCSSLEELYFIGSFNDFCREITFPKLQRFDIGEFSNLVDKSSLKGVSDLVISDNVFLSETTLKYCMQEAEVLELGRIEGGWRNIVPEIVPLDHGMNDLIELGLRSISQLQCLIDTNSPVSKVFSKLVVLKLKGMDNLEELFNGPVSFDSLNSLEKLSINECKHLKSLFKCNLNLCNLKSLSLEECPMLISLFQLSTVVSLVLLEKLEIIDCERLENIIIVEKNGDELRGEIIDANGNTSHGSMFPKLKVLIVESCPRIELILPFLSTHDLPALKSIKIEDCDKLKYIFGQDVKLGSLKKLELDGIPNLIDIFPECNPTMSLSIKKPSSISESQEQSEPIKCNMFSWTDIYCCGKKYGHNKLRSTTITKIPLVSQDQLLDNLMESNSYPLNIWESAQCLSRQSHILCNIKKITLWKISKMKSVFILSIAPTMLLESLTIYKCNELKHIIIDMGDHDNTGGNNWGTVFPKLRLFEVEHCEKLEYIIGHFTDDHQNHTEIPLHLPALETFVLHNLPSLVSMCPKQYHTTFPQLERLVVEECPQFIGDFITHHSITRSVDGTIIKELSGNVEHFCALESLEVDHSNVESIFRVDEINERQMNLALEDIDLDVLPMMTCLFVGPNNSFSLQNLTRIKIKGCEKLKIVFTTSVIRCLPQLYYMRIEECNELKHIIEDDLENKNSSNFMSTTKTFFPKLEKVVVEKCNKLKYVFPISICKELPELNVLMIREADELEEIFVSEGDDHKVEIPNLECVVFENLPSLSHAQRIQFQAVKNRFIRNCQKLSLESTKIHDLSASYFRIDPELCRYFKTRFRQQFQKETKGNNSGNENPETSKKIAVGVEVKASSEHELTSPKKKTKQTPETEHELVENVPDLEIPTNSKELMNEQSMEQQRLLGEPDTTVKPSQLEVSTISETKNVAETCSTNSPTKNESPIQVSEISVQEGTTSSNAKRRTTSSQEYSDGEMAISSPPISMTRHFSTQDIHVNNLQETSNTDDDQVSLNDDAVIKVTSIVEEPFSKDVEFKVPESKLSLIITSPQQFRTPSMLSKGDPSQPDEELEDLDDQMDMTSFSIATTETNDEVSRNDDAFKKVSSNIEEQFPKIDDIIVVSKSKPSPWITSSVASQKPPVPSKGDPSQKVEDFSSSLLVKHFDYENLSLLTDFFVKHPSVLLNDTSLSNRYKGYAYNCLAELLKFLQTHSVLDVLGSSHSEFVELLQDVRKFGFDKEWLDDIEKRALLPGLQVSQDALQKLLDSKHILTQHVEDLKHQLASCEAVLQNITQQEAQILHTRAALSDPIGY* 1942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1872 1941 Pfam NB-ARC domain 155 390 IPR002182 GO:0043531
Mtr3g1872 1941 MobiDBLite consensus disorder prediction 1684 1704 - -
Mtr3g1872 1941 Gene3D - 299 392 IPR042197 -
Mtr3g1872 1941 Gene3D Ribonuclease Inhibitor 878 984 IPR032675 -
Mtr3g1872 1941 Gene3D Ribonuclease Inhibitor 1173 1390 IPR032675 -
Mtr3g1872 1941 Gene3D Ribonuclease Inhibitor 730 870 IPR032675 -
Mtr3g1872 1941 PRINTS Disease resistance protein signature 168 183 - -
Mtr3g1872 1941 PRINTS Disease resistance protein signature 241 255 - -
Mtr3g1872 1941 PRINTS Disease resistance protein signature 334 348 - -
Mtr3g1872 1941 PRINTS Disease resistance protein signature 599 615 - -
Mtr3g1872 1941 PANTHER - 1244 1325 - -
Mtr3g1872 1941 PANTHER - 1036 1133 - -
Mtr3g1872 1941 PANTHER - 79 962 - -
Mtr3g1872 1941 MobiDBLite consensus disorder prediction 1491 1515 - -
Mtr3g1872 1941 SUPERFAMILY RNI-like 1217 1377 - -
Mtr3g1872 1941 Gene3D Ribonuclease Inhibitor 456 724 IPR032675 -
Mtr3g1872 1941 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1244 1325 - -
Mtr3g1872 1941 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 79 962 - -
Mtr3g1872 1941 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1036 1133 - -
Mtr3g1872 1941 Gene3D - 136 295 IPR027417 -
Mtr3g1872 1941 Coils Coil 1904 1924 - -
Mtr3g1872 1941 MobiDBLite consensus disorder prediction 1761 1780 - -
Mtr3g1872 1941 MobiDBLite consensus disorder prediction 1486 1616 - -
Mtr3g1872 1941 Coils Coil 34 54 - -
Mtr3g1872 1941 SUPERFAMILY L domain-like 458 863 - -
Mtr3g1872 1941 MobiDBLite consensus disorder prediction 1524 1608 - -
Mtr3g1872 1941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1872 Mtr-Chr3 31621489 31636236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1872 169 642 WRKY Transcription Factor Family AT5G45050 22.684 4.41e-14 76.3