Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1862 ATGGCAGATGAAGCACAGATTGATGTGAAGGAGGAGGTTCCTGATATTGCACCATTTGATCCTACTAAAAAGAAGAAGAAAAAGAAGCCTGCAGTGGTAGATCTTGATGATGATTCAGTAGACAAGTTGGCTGAGAAGACAGAAAATCTGTCAGTTTCTGAGGGGTTTGACAGTATATTAGCTGGTTCGAAAAAGAAGAAGAAGAAGCCTGTTGAAATCAGTAGCTTAATTGATGAGAGTGATGCGAAGAATGAAGATTTGGATGATCACGCTGAAGAGGATGAAGGAGATGCTGTTTCCTTGCAACCTCGTTACCCTTGGGAAGGAAGTGATCGTGATTATCAATACGAGGAGCTTTTGGGCAGGGTTTTTAACATTCTACGTGAGAATAATCCAGAACTTGCTGGAGACCGGCGGAGGACTGTTATGAGGCCTCCACAAGTGCTTCGTGAGGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGACCTATGCAAAACGATGCATCGGCAGCCAGATCATGTCATGACTTTCTTGCTTGCGGAGTTGGGTACAAGTGGTTCTCTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGGTTTGCACCAAAGAACTTCGAAGGAATTTTGCGTCGATATATCAATGAATATGTCATTTGCCTTGGATGCAAAAGTCCTGACACAATACTGTCAAAGGAGAACCGTTTGTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCACCTATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGACTGCTGGAGGGACATGA 810 0.4383 MADEAQIDVKEEVPDIAPFDPTKKKKKKKPAVVDLDDDSVDKLAEKTENLSVSEGFDSILAGSKKKKKKPVEISSLIDESDAKNEDLDDHAEEDEGDAVSLQPRYPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRTAGGT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1862 269 MobiDBLite consensus disorder prediction 1 40 - -
Mtr3g1862 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 267 IPR045196 GO:0003743|GO:0006413
Mtr3g1862 269 Gene3D - 111 253 - -
Mtr3g1862 269 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Mtr3g1862 269 MobiDBLite consensus disorder prediction 59 107 - -
Mtr3g1862 269 MobiDBLite consensus disorder prediction 60 84 - -
Mtr3g1862 269 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 113 220 IPR016189 GO:0003743|GO:0006413
Mtr3g1862 269 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Mtr3g1862 269 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
Mtr3g1862 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1862 Mtr-Chr3 31340946 31345284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1862 1 264 Eukaryotic Initiation Factors Gene Family AT5G20920 74.532 1.33e-130 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1862 K03238 - gmx:100783618 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1862 3 31340946 31345284 Mtr3g1862 3 31340946 31345284 ECH