Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1860 ATGGCTTTTCATCACATCCAATATTATTTCATTGTTCTCTTAATGGCCACATTTCTTACAACTCATTCCAATGCAGAACTAACACCTGATTTTTACAACGATGTTTGCCCTCAAGCATTGTCTATCATTAACACAATTGTTCGACAAAAACTTGATTTTAAACCACGTATGGGAGCACATTTACTAAGGTTGCATTTCCATGACTGTTTTGTCAATGGGTGTGATGGATCAGTTCTGCTGGATGACACTCCTAACTTCATAGGTGAAAAGACTGCCAAAGGAAATATTGATTCACTTAAAGGCTTTATGCTTGTTGATATAATTAAAGCAGAACTTGACAAAGCTTGCAAAGGCCCTGTGGTATCATGTGCAGATATCTTAGCAGTAATTGCTCGTGATTCTGTGTCCATTTTAGGAGGTCCAAGCTATTGGTACCAAGTGCTACTAGGAAGAAGAGATGCAAGAAATGCTTCAATGAAAGATGCAGAATCATATCTTCCTTCACAACTTTTCAATCTTTCACAACTTGTTTCTAACTTTGAGTCTCAAGGCCTAAACCTTAAAGATCTTGTAGCACTTTCTGGTGCTCACACAATTGGAATGGCTAAGTGTTCTACCTTTAGGGAAAGGATTTACAATGACACCAATATAGACCCTGACTTTGCAACATGCTTACAAGATAATTGTCCTTTACATGGTGGTGATGACAATTTTGAAGCATTGGATTTTCTCACTCCTCAAGTATTTGATAATTCTTACTACAAAAATTTGGTTAGTAAAATAGGTCTCTTCCATTCTGATCAAGAACTCTTTAAGGGAGATGGAAGTGAAAGTGATATGTTGGTGGAACTTTATAGTAGAGACTCAGATGCTTTTGCAAGAGATTTTAAAGCTTCCATGATTAAGATGGGTAATATAAAGCCTCTTACTGGAAACTTTGGAGAGATTAGAACCTATTGTGGAAAAGTTAACTAA 975 0.3651 MAFHHIQYYFIVLLMATFLTTHSNAELTPDFYNDVCPQALSIINTIVRQKLDFKPRMGAHLLRLHFHDCFVNGCDGSVLLDDTPNFIGEKTAKGNIDSLKGFMLVDIIKAELDKACKGPVVSCADILAVIARDSVSILGGPSYWYQVLLGRRDARNASMKDAESYLPSQLFNLSQLVSNFESQGLNLKDLVALSGAHTIGMAKCSTFRERIYNDTNIDPDFATCLQDNCPLHGGDDNFEALDFLTPQVFDNSYYKNLVSKIGLFHSDQELFKGDGSESDMLVELYSRDSDAFARDFKASMIKMGNIKPLTGNFGEIRTYCGKVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1860 324 PANTHER CATIONIC PEROXIDASE 5 323 - -
Mtr3g1860 324 Gene3D Peroxidase, domain 2 167 303 - -
Mtr3g1860 324 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PANTHER PEROXIDASE 72-RELATED 5 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Mtr3g1860 324 Gene3D - 30 320 - -
Mtr3g1860 324 Pfam Peroxidase 47 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1860 324 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601|GO:0042744
Mtr3g1860 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Mtr3g1860 324 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1860 Mtr-Chr3 31334292 31337011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1860 25 324 Peroxidase AT5G05340 53.642 2.11e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1860 K00430 - gmx:100816580 441.81