Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1850 ATGCTTTTCCAAGCTATAAGTTACACTCCTAGTTTCTTACGGCCACTTCCTCAGTCCTTTTGGCATCTTCTCCTTATTATATTTTTTAGTTTTATGGTAATCAAAACCATAAGATACCACTTAGTTGAGAACCCTAAAAAAGCCAAACTTCCACCCGGTCCCAAACCATGGCCTATCGTTGGTAATATTCCTGAAATGCTTGCAAATAAACCTGCTACTAGGTGGATACACAAGATAATGGAAGAATTGAACACTGAAGTAGCGTGTATCCGCCTAGGAAATGTCCATGTTATTCCTGTTACCTGTCCCACCATTGCCCTTGAATTCTTGAGAAAGAATGATGCTACTTTTGCATCAAGACCAATATCCATGTCCACTGATATCATCAGCAAAGGTTTCTTGACAACCGCCGTTACACCTTTTGGAGAACAATGGAAGAAAATGAAGAAAATATTTGTCAATGAATTGTTCTCCCCTCACAGGCATCAATGGCTCACTAACAAAAGGAATGAAGAAGCTGATAACATAATGTTTTATGTCTACAACAAATGCAAAAATGCGAATGATAATGGTCTTGTGAATGTTAGGATTGTTACAAGGCATTATTGTTGTAATTTGATGAGGAAATTGGTTTTTAATACAAGGTACTTTGGAGAAGGAAGTAATGATGGAGGTCCTGGTTTGGAGGAAGTTGAACATGTAGATGCTATTTTCACATTGCTTAGATATGTTTTTGCATTTTGTGTTTCTGATTATATGCCATTCTTGAGAGGACTTGACTTTGATGATCATGAGAGAAGGGTGAAAGATGCTATGAGTATTGTGGACAAGTATAACGATCCTATCATTGAAAGGAGAATTCAAAAATGGAAAGATGCATCAAAGACTAGTGCTGATTCAGAGGACTTACTTGATATTCTAATCTCCCTTAAAGATGCCAACAACAAACCATTATTGACATCAGAGGAAATCAAGGCTCAAGCTCTAGAACTTGTGTTAGGAGGAGTGGACAATCCATCACATGCAGCTGAATTTGCAATAGCAGAAATGATAAATCAGCCAGATTTACTTCAACGAGCCACTGAAGAATTGGATAATGTTGTAGGAAAACAACGACTAGTCCAAGAATCGGATATTCCAAACCTCAACTATGTGAAAGCTTGTGCAAAAGAAGCTTTTCGCCTTCATCCAATTACAATTTTTAATCCTCCCCATGTTGCTATGGACAATATAACGGTTTCTAAATACATGATTCCAAAAGGAAGCCATGTACTTCTAAGTAAACAAGGACTCGGACGAAATCCAAAAGTTTGGAATGAACCTCACAAGTTTCAACCTGAACGCCATTTAAAAAATGATGGGTCTATGGTAGTTTTGTCGGAACCAGATTTGAAGTTCATATCATTTAGTACGGGAAGGCGTGGTTGCCCCGGAATTGTGCTTGGAACCTCAATGACTATGATGTTATTGGGCAGGTTGCTCCATGGCTTTGATTGGAGTGGTCCTCCTAATGAATCAACCATTGAACTTCTCAAGTATTCCAATGGTGATAGATACCTTGGAGGGCCAATTGTGGCAATAGCAAAGCCAAGATTGGCCGCAGAGTTGTATCATCAATAA 1620 0.3858 MLFQAISYTPSFLRPLPQSFWHLLLIIFFSFMVIKTIRYHLVENPKKAKLPPGPKPWPIVGNIPEMLANKPATRWIHKIMEELNTEVACIRLGNVHVIPVTCPTIALEFLRKNDATFASRPISMSTDIISKGFLTTAVTPFGEQWKKMKKIFVNELFSPHRHQWLTNKRNEEADNIMFYVYNKCKNANDNGLVNVRIVTRHYCCNLMRKLVFNTRYFGEGSNDGGPGLEEVEHVDAIFTLLRYVFAFCVSDYMPFLRGLDFDDHERRVKDAMSIVDKYNDPIIERRIQKWKDASKTSADSEDLLDILISLKDANNKPLLTSEEIKAQALELVLGGVDNPSHAAEFAIAEMINQPDLLQRATEELDNVVGKQRLVQESDIPNLNYVKACAKEAFRLHPITIFNPPHVAMDNITVSKYMIPKGSHVLLSKQGLGRNPKVWNEPHKFQPERHLKNDGSMVVLSEPDLKFISFSTGRRGCPGIVLGTSMTMMLLGRLLHGFDWSGPPNESTIELLKYSNGDRYLGGPIVAIAKPRLAAELYHQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1850 539 Pfam Cytochrome P450 51 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 Gene3D Cytochrome P450 36 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 18 537 - -
Mtr3g1850 539 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1850 539 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 18 537 - -
Mtr3g1850 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Mtr3g1850 539 SUPERFAMILY Cytochrome P450 51 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1850 Mtr-Chr3 31193121 31194946 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1850 7 537 Cytochrome P450 AT4G39950 51.692 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1850 - K14984 gmx:100787378 744.962