Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1844 ATGGTTGTGGAAATATATTTCATAGTTATATGTCTACTCACTTTGAGTTTAGCTTTTCTCCTCACGAAATTTCTCTCAAAAAGTAAAATTAAAAATGTTCCAAAAGGATCTATGGGATATCCTCTCATTGGAGAGACATATGGTTTTCTTAAAGCACTGAGGCAAGACAAGGGCTCTGAGTGGTTAGAAGAAAGGGTAGCTAAATATGGTCCTGTCTTCAAAACTTCCATATTGGGTTCCCCTACTGTGTTTATTATTGGTCAACAGGGAAACAAGTTTGTTCTTGGTTCCTCACATGATGTTCTTTCTAGTAAGAAACCTCCAACACTTCAAAGGATTTTTGGAAAACAAAGCCTACTTGAACTCACAGGATCAAGGTTCAAGTTGGTTAAGGGGGAAATGCTGAAATTCTTGAAACCTGAATGCCTTCAAAACTATGTAGAAAAGATGGATGAATTAGTGAAAACAGTATTATTGAGAGAATTGAAAGAGAATAAAACAATTGAAGTTGTGAGGTTGATGAAGAAACTGACCTATGATATGGCTTGCAATATATTGTTTGACATAGATGAACAAACAAGGGAGGTTTTGTATGAAGATTTTATCTTAGCATTTAAAGCAATTCATTCTCTTCCCATCAATTTCCCTGGAACCTCACTTTGGAAAGGCCTAAAGGCTAGAGAAAGAATTGTGGACAAAATACTTCCAATTATGAACAAAAGAAGGGAGGAATTGTCAAAAGGAGTTCTAAGCTCTACTAACGATATGATTTCATGCCTTCTTGCAATAAGGGATGAAAATAATCAACCTTTAGATGAAGAAATGATTGTTGGCACTTTTATTTTTATATTTGTTGCAGGTCATGACACATCTGCTACTCTTATGACCTTGATGATATGGAAGTTATCTAGAGATCAAGAGGTTTACAATAATGTTTTAGAAGAACAAATGGAAATCATAAAGCAAAGGGAAGGAAATGAAGACAGGCTAACATGGGGAGAGATACAAAATATGAAATACACATGGAGAGTTGCTCAGGAGTTGATGAGAATGATCCCTCCTTTGTTTGGGGCCTTTAGGAAAACAATCGAAGATACTAATTACGAAGGATATGACATACCAAAAGGGTGGCAGGTATATTGGGCATCATGTGGAACTCATATGAACAAAGATATATTCGAGAATCCTGAAAAGTTTGATCCATCTCGTTTTGAAAATCGAACCAAGTCAATTCCACCCTTTTCTTACATCCCATTTGGTGCAGGGCTTCACTATTGCATAGGAAATGAGTTTGCTAGGGTTCAAACCTTAACCACTATTCACAATTTTGTGAAGACATATGAATGGTCTCAAATGAACCTAGAGGAAACAATTACTCGTCGACCAATGCCATATCCATCCTTGGGTCTCCCAATTAAGATCAAACCTAGATGCAATATGTCTTAA 1446 0.3631 MVVEIYFIVICLLTLSLAFLLTKFLSKSKIKNVPKGSMGYPLIGETYGFLKALRQDKGSEWLEERVAKYGPVFKTSILGSPTVFIIGQQGNKFVLGSSHDVLSSKKPPTLQRIFGKQSLLELTGSRFKLVKGEMLKFLKPECLQNYVEKMDELVKTVLLRELKENKTIEVVRLMKKLTYDMACNILFDIDEQTREVLYEDFILAFKAIHSLPINFPGTSLWKGLKARERIVDKILPIMNKRREELSKGVLSSTNDMISCLLAIRDENNQPLDEEMIVGTFIFIFVAGHDTSATLMTLMIWKLSRDQEVYNNVLEEQMEIIKQREGNEDRLTWGEIQNMKYTWRVAQELMRMIPPLFGAFRKTIEDTNYEGYDIPKGWQVYWASCGTHMNKDIFENPEKFDPSRFENRTKSIPPFSYIPFGAGLHYCIGNEFARVQTLTTIHNFVKTYEWSQMNLEETITRRPMPYPSLGLPIKIKPRCNMS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1844 481 SUPERFAMILY Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 475 - -
Mtr3g1844 481 PANTHER CYTOCHROME P450 26 6 475 - -
Mtr3g1844 481 Gene3D Cytochrome P450 24 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 Pfam Cytochrome P450 41 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g1844 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1844 Mtr-Chr3 31117884 31121144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1844 1 481 Cytochrome P450 AT4G19230 32.317 8.62e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1844 - - gmx:100790209 755.747