Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1841 ATGAACGAAAACATCTCAAACTGGATAATGGAATTCCTCCTCCGTAACACCACCGTACCCGATCCCCTAATTCAAAAAACCCTAACCCTACTTCCACTCTCCGGCGCCGATTCGCGTCTCAAAAAAACCCTCCTCCTCCGCGTACTTCAAACCCACATCCTCAACGCTTCAATCTCCGAAGCCTCTCTCCAAATCCTCGAACATTTGGAAGAGATTTACCGCGACGACGGAGTTTCTATCTCGAATGCGTTTCAGAGTGCTTACTGTGCTGTTGCGGTGGAATGTACGGTGAAGTATTTGATTAATTCGCCGGAGGATCCGTCTGGTGAGTATTTTTCGGCGGTGAGGAGGATTTGGAGGGGAAGGAGAGGGAGTGGGTTGGTGTCGGATGGGTTTGTGCAGTGGGGGGAAGAGATTGAAGGTGCGCTTTGGGATGTTAGGGTTGCGGAGAGGTTGGTGGGGTTGAATACGAGGAGAGATGCGGTTATTGAAGTGAAGAGGTTTTTGAAGGAAGCGTGGGGGAGTATGGGGGATTCGTTTCTTGATTTGATTGCGATGGTTTCGAAGGGGAATGGTTTGTGTCCGGGAGGTGTTTGTGAAAATGCTGCTGAGGGGAGTAGAAGGTTGTTAGAAGGTTTGGGGAAAGCGAAAGCGAATGATGATGATGTAGCAATGGGTGAAAATCATGGTAATCGGCAATTGGAAGAGAATGGCTTGGGTGGTGGAATGTCGAGGAGGCGTAATGGGAGGTTAGAAGGTTTGGGGAAAGAGAAAATGAATGATGATGAGAATGATAATGTGAATGATATTGTTGATGATAGTGATGATAATGACGATGAGACAATGATGGGTGAAAATCATGGCAATGAGGAGTTGGAAGAGAGAGTTGGTACTTCTGTTGATGCGAATCAGGAAGTGGAACAAAGAGCTGGTACATCTAGAATGGGAGATAAAGGTGTTTGTGAAATTGCTGAAGAGGGTGAAGATTTAAGGAAGCGTGATGGGAGGTTAGAAGGTTTGGGAAAGGAGAAAATGAATGATGATGGTGACGATGTGAATGATAATGTTGATGGTGACGATGGTGTAGAATTGATGGATGGAAATCGTGGCAATGAACAATTGGAAGCGAGAGTTCGCACTTCTGGAATGAGAGATAAAGAAATTCGGAAAGACAATGGTCAGCTCAAACGCAAGCACTCTGCACTACAAACAAGACACAGGGGAGTTAAACTCTCTGGTGATGAGGAAGCGAGGCCGATAAATTTTTCGACTAAATATGAAAATCTGCGTAGTGCTGATGTGAAGAAACTTCGGGAGTCCCTTAAATCAAGTTCTTTGGAGCTAAAAGCATTGGTCAAAGATCCTCTTCCTGATGCATTGCACACATCTGAAGCCGTAAGATCCAAATTGGCTACAAAAGATATAAATCGCAGGCCAGCCAGTGAAAAGCAGAGTGAACATGTAGATGTACGAGATTCAGATGCATGCAAGACTATTGTACCATATCAGCCTAATGATGCCAATTTTGCCAAGGAGCCTTCTGTTCCTTGTAGTAGTGATCGCCCTAACTGTAGTAATGGTAGTCGCCCCAACTATAGTAATGATCGTCGCCCGAACTTAATGCGACGGGCAAGTTATGCTCAAACATACGAGTGGGATGATTCAATAGAGAACTTACCGCAACAAAGTCTGCCAAGAAGGAAGAAAAGGAAATGGACTTCCTTGGAAGAAGAGACGCTAAGGGCTGGTGTAAGAATGTTTGGAGAAGGAAACTGGAGGACAATCCTAGACTTTTACAGCACCATATTTGAATATAGAAATGGAGTTGATCTGAAGGACAAGTGGAGAAATATGATGCGGTGA 1863 0.4493 MNENISNWIMEFLLRNTTVPDPLIQKTLTLLPLSGADSRLKKTLLLRVLQTHILNASISEASLQILEHLEEIYRDDGVSISNAFQSAYCAVAVECTVKYLINSPEDPSGEYFSAVRRIWRGRRGSGLVSDGFVQWGEEIEGALWDVRVAERLVGLNTRRDAVIEVKRFLKEAWGSMGDSFLDLIAMVSKGNGLCPGGVCENAAEGSRRLLEGLGKAKANDDDVAMGENHGNRQLEENGLGGGMSRRRNGRLEGLGKEKMNDDENDNVNDIVDDSDDNDDETMMGENHGNEELEERVGTSVDANQEVEQRAGTSRMGDKGVCEIAEEGEDLRKRDGRLEGLGKEKMNDDGDDVNDNVDGDDGVELMDGNRGNEQLEARVRTSGMRDKEIRKDNGQLKRKHSALQTRHRGVKLSGDEEARPINFSTKYENLRSADVKKLRESLKSSSLELKALVKDPLPDALHTSEAVRSKLATKDINRRPASEKQSEHVDVRDSDACKTIVPYQPNDANFAKEPSVPCSSDRPNCSNGSRPNYSNDRRPNLMRRASYAQTYEWDDSIENLPQQSLPRRKKRKWTSLEEETLRAGVRMFGEGNWRTILDFYSTIFEYRNGVDLKDKWRNMMR* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1841 620 Pfam Myb-like DNA-binding domain 569 618 IPR001005 -
Mtr3g1841 620 MobiDBLite consensus disorder prediction 249 265 - -
Mtr3g1841 620 ProSiteProfiles Myb-like domain profile. 564 619 IPR001005 -
Mtr3g1841 620 SMART sant 568 620 IPR001005 -
Mtr3g1841 620 MobiDBLite consensus disorder prediction 391 410 - -
Mtr3g1841 620 MobiDBLite consensus disorder prediction 266 280 - -
Mtr3g1841 620 Coils Coil 434 454 - -
Mtr3g1841 620 MobiDBLite consensus disorder prediction 220 299 - -
Mtr3g1841 620 PANTHER MYB TRANSCRIPTION FACTOR 1 620 - -
Mtr3g1841 620 MobiDBLite consensus disorder prediction 281 299 - -
Mtr3g1841 620 PANTHER MYB TRANSCRIPTION FACTOR 1 620 - -
Mtr3g1841 620 MobiDBLite consensus disorder prediction 504 537 - -
Mtr3g1841 620 MobiDBLite consensus disorder prediction 518 535 - -
Mtr3g1841 620 MobiDBLite consensus disorder prediction 470 492 - -
Mtr3g1841 620 Gene3D - 562 620 - -
Mtr3g1841 620 Coils Coil 289 309 - -
Mtr3g1841 620 CDD SANT_TRF 570 620 - -
Mtr3g1841 620 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 564 620 IPR017930 -
Mtr3g1841 620 SUPERFAMILY Homeodomain-like 565 619 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1841 Mtr-Chr3 31096654 31103125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1841 572 619 Single Myb Histone (SMH) Gene Family AT1G15720 47.917 9.62e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr3g1841 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1841 - - mtr:MTR_3g467090 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1841 3 31096654 31103125 Mtr3g1841 3 31096654 31103125 ECH