Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr3g1836 | ATGTTACCTCCCAACTTTGAGTTCCCAGTTTACGAGGCTTGGGTAGAAGAGGATGAAGAGATTCCCGATGAACTCCGATGGATGTTAGAGCAAGAAAGAAAAGCTATTCAGCCTTACAAGGAAGAAATAGAGTTGATCAACCTGGGCACTGAGGATGATAAAAAAGAAATTAAGATTGGAGCGTCGTTGGAGGCGTCTGTCAAGAAAAAGATAATTGAGCTTCTCAGAGAGTATGATGATATATTTGCATGGTCCTACAAAGACATGCCGGGGTTAGACCATGATGTTGTGGAACACCGTTTGCCTTTGAAGCCCGAGTGTCCTCCAGTCAAGCAGAAGTTAAGAAGATCTCATCCAGATATGGCTCTCAAGATCAAAGAGGAAGTGCGAAAGCAAATTGATGCAGGTTTCTTGATTACCTCTGAGTATCCTCAATGGTTGGCCAACATAGTGCCCGTTCCAAAGAAAGATGGTAAGGTCAGAATGTGTGTTGACTATCGGGATTTGAACAAAGCTAGTCCGAAGGATGATTTCCCTTTACCTCACATTGATGTATTGGTTGATAGTACTGCTAGATGCAAGGTATTCTCCTTCATGGATGGATTCTCCGGGTATAACCAGATCAAGATGGCTCCAGAAGATAGAGAAAAGACGTCGTTCATCACGCCTTGGGGTGCTTTCTGCTACTTGGTAATGCCATTTGGGTTGATAAATGCTGGTGCCACTTACCAGAGAGGCATGACTAAAATATTCCATGATATGATACATAAAGAGATTGAAGTGTATGTGGATGACATGATTGTCAAATCAGGCACTGAAGAAGAACATGTTGAATCCGGCAAGCTCTTGGGTTTTATCGTCAGCCAGAAGGGTATTGAAGTAGATCCCGACAAAGTCAAAGCTATCAGGGAAATGCCTGCTCCAAGGACAGAGAAACAAGTTAGAGGTTTTCTAGGAAGACTGAACTACATCTCCAGATTCATCTCTCATATGACTGCCACATGTGGGCCGATATTCAAGTTACTCCGTAAAGATCAAGGGATTGTTTGGACGGAAGATTGCCAGAAAGCTTTTGACAGCATCAAAGGGTATTTGTTAGAACCTCCGATTCTTGTCCCTCCGGTCGAAGGGAGGCCTTTGATCATGTATTTGACTGTGTTAGAAGATTCTATGGGCTGTGTGTTGGGTCAACAAGACGAGACTGGAAAGAAAGAGCACGCCATTTACTACTTGAGTAAGAAGTTTACCGATTGTGAGTCCCGATATTCTATGCTTGAGAAAACCTGTTGCGCTTTGGCATGGGCTGCTAAGCGTCTTCGTCACTATATGGTTAATCACACTACTTGGTTGATATCCAAAATGGATCCGATCAAGTACATTTTTGAGAAGCCGGCTTTAACAGGAAGAATTGCTCGTTGGCAGATGTTATTGTCCGAGTATGATATTGTCTACCGCACTCAGAAAGCCATCAAAGGTAGTATTCTGGCTGACCATTTAGCTCATCAACCAATTGAAGATTATCAGCCTATCAAGTTTGATTTTCCAGATGAAGAGATCATGTATTTAAAGATGAAAGATTGTGACGAACCGTTGTTTGGTGAAGGTCCTGATCCAGACTCCAAGTGGGGTTTGATATTTGATGGGGCGGTTAATGTCTATGGTAATGGAATAGGGGCAGTTATCCTTACTCCAAAGGGTACTCACATTCCTTTCACTGCAAGACTCCGGTTTGATTGTACGAACAACATTGCAGAATATGAAGCTTGCATCATGGGTATTGAAGAAGCCATTGACTTGAGGATTAAAAATATTGACATATACGGAGATTCTGCTCTTGTGATTAACCAGATCAAAGGAAAATGGGAGACTCATCATGATGGTTTGGTACCGTACAGAGACTATGCAAGACGTCTTTTGACTTTCTTCAACAAGGTGGAACTGCACCACATTCCTCGGGATGAGAATCAAATGGCGGATGCCCTAGCTACTTTATCTTCAATGATCAAAGTGAATCATGGCAACGACGTGCCGCTGATCAGTGTCAAATTCCTTGATAGGCCTGCTTATGTGTTTGCAGCCGAAGCAGTTTTCGATGATAAGCCGTGGTTTCATGATATTAAAGTGTTTCTTCAAACTCAAGAGTACCCTCCTGGGGCATCCCGTAAAGATAAGAGAACCTTAAGAAGATTGTCTGGTAACTTCTTTCTAAGTGGAGATGTTTTGTACAAAAGGAACTTTGATTCAGTTTTACTCAGATGTGTGGACCGACGAGAAGCAGATTTGTTAATGCATGAGATACATGAAGGATCATTTGGGACCCATTCTAGTGGATATTCAATGGCTAAGAAAGCATTGAGAGCAGGCTACTACTGGATAACGATGCATGCTGACTGCCATCACTATGCTAAGAAATGTCACAAATGCCAGATTTATGCGGACAAGATTCATGTGCCGCCGTCTATGCTCAATGTTATCTCATCTCCGTGGCCGTTCTCTATGTGGGGCATTGATATGATTGGTCGGATCGAACCAAAAGCTTCCAATGGACATCGATTCATACTAGTGGCCATTGACTACTTCACCAAGTGGGTTGAAGCGGCTTCTTATGCCAATAAGATGGTAGTCACCTATAAGGACTGGCATGAGATGTTACCCTATGCTCTATATGGTTACCGTACTTCAGTGCGTACTTCAACAGGGGCAACCCCTTTTTCCTTGGTGTATGGTACGGAAGCGATACTTCCCGTAGAAGTTGAAATCCCGTCTTTGAGAGTCTTGATGGAAGCTGAGTTATCAGAGGCTGAATGGTGTCAGAATAGGTACGATCAGTTGAATTTGATTGAGGAAAAGCGCATGGCTGCTTTGTGTCATGGACAACTATATCAGACCAGGATGAAACAAGCATTTGATAAGAAGGTTCGTCCCCGTGAATTTAAAGAAGGAGACCTAGTGGTCAAGAGTATCAAGTCTTTTCAACCAGACCCCAGGGGCAAGTGGACACCTAATTATGAAGGTCCCTATGTGGTGAAGAGAGCCTTCTCTGGTGGACCAGAGGTCTGGCCTTCCCCATTGGAGGTTCAAAGGATTATCACAAAGTTCAAAAATTATTCAGAATACGAGCAAGGAAAGAAAAAGTTGAACCAAGAGAGCTATTTGATGGATAGGATTATGAAGTCAAAAGAGAAATTGGGGAAAGTGCAGAGAACCAATTGGGAGATGGAGAAGTCCTTGATCTTGTTTCAATGTCTCGTTCAAGAAAATTTTATCAACACTCTGAACACAAACGTTTTGAATGATCTAGCAAGTGAAATTAATGAGAAGCTTAAGGAAATTACTTCAAAGATGAATCAACTTGACACAAATGAAACCACTTAG | 3375 | 0.4246 | MLPPNFEFPVYEAWVEEDEEIPDELRWMLEQERKAIQPYKEEIELINLGTEDDKKEIKIGASLEASVKKKIIELLREYDDIFAWSYKDMPGLDHDVVEHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLITSEYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTARCKVFSFMDGFSGYNQIKMAPEDREKTSFITPWGAFCYLVMPFGLINAGATYQRGMTKIFHDMIHKEIEVYVDDMIVKSGTEEEHVESGKLLGFIVSQKGIEVDPDKVKAIREMPAPRTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGIVWTEDCQKAFDSIKGYLLEPPILVPPVEGRPLIMYLTVLEDSMGCVLGQQDETGKKEHAIYYLSKKFTDCESRYSMLEKTCCALAWAAKRLRHYMVNHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIVYRTQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLFGEGPDPDSKWGLIFDGAVNVYGNGIGAVILTPKGTHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIDIYGDSALVINQIKGKWETHHDGLVPYRDYARRLLTFFNKVELHHIPRDENQMADALATLSSMIKVNHGNDVPLISVKFLDRPAYVFAAEAVFDDKPWFHDIKVFLQTQEYPPGASRKDKRTLRRLSGNFFLSGDVLYKRNFDSVLLRCVDRREADLLMHEIHEGSFGTHSSGYSMAKKALRAGYYWITMHADCHHYAKKCHKCQIYADKIHVPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANKMVVTYKDWHEMLPYALYGYRTSVRTSTGATPFSLVYGTEAILPVEVEIPSLRVLMEAELSEAEWCQNRYDQLNLIEEKRMAALCHGQLYQTRMKQAFDKKVRPREFKEGDLVVKSIKSFQPDPRGKWTPNYEGPYVVKRAFSGGPEVWPSPLEVQRIITKFKNYSEYEQGKKKLNQESYLMDRIMKSKEKLGKVQRTNWEMEKSLILFQCLVQENFINTLNTNVLNDLASEINEKLKEITSKMNQLDTNETT* | 1125 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr3g1836 | 1124 | CDD | RNase_HI_RT_Ty3 | 391 | 499 | - | - | |
| Mtr3g1836 | 1124 | Coils | Coil | 1097 | 1121 | - | - | |
| Mtr3g1836 | 1124 | Gene3D | - | 178 | 301 | IPR043128 | - | |
| Mtr3g1836 | 1124 | Gene3D | - | 544 | 679 | IPR036397 | GO:0003676 | |
| Mtr3g1836 | 1124 | SUPERFAMILY | DNA/RNA polymerases | 94 | 480 | IPR043502 | - | |
| Mtr3g1836 | 1124 | Pfam | Integrase zinc binding domain | 755 | 811 | IPR041588 | - | |
| Mtr3g1836 | 1124 | Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) | 153 | 302 | IPR000477 | - | |
| Mtr3g1836 | 1124 | Gene3D | - | 720 | 811 | - | - | |
| Mtr3g1836 | 1124 | Gene3D | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 97 | 238 | - | - | |
| Mtr3g1836 | 1124 | SUPERFAMILY | Ribonuclease H-like | 828 | 917 | IPR012337 | - |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Pathway information