Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1835 ATGGTTGATGAACTCACTACCCTGTGTGGGATTGATGTCTGCGCTATACTTTATAGCGAATTTCATTCTGAGCCTGAGGTCTGGCCTTCCCCGTTGGAGGTTCAAAGGATTATCACAAAGTTCAAAAGTTATTCAGAAGTCGGGCAAGAAAGGAAGAAATTGAACCAAGAGAGCTATTTGATGCAGAGGATTGGGAAGTCACAAGAGAAGTTGGTGAAAGTGGAGAAGGCAAATTGGGAGATGGAGAGGTCCTTGATCTTGTTTCAATGTCTCCAACAAGAAAATTTTATCAACACCTTGAACACAAATGTTTTGAATGAGCTAGCATGGGAAATTAATGACAAGCTTAAGGAAATTACTTCAAAGATGAATCAACTTGACACAAATGAAAGCACTTAG 399 0.3985 MVDELTTLCGIDVCAILYSEFHSEPEVWPSPLEVQRIITKFKSYSEVGQERKKLNQESYLMQRIGKSQEKLVKVEKANWEMERSLILFQCLQQENFINTLNTNVLNELAWEINDKLKEITSKMNQLDTNEST* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1835 132 SUPERFAMILY SRF-like 3 64 IPR036879 GO:0003677|GO:0046983
Mtr3g1835 132 Gene3D - 1 69 IPR036879 GO:0003677|GO:0046983
Mtr3g1835 132 PANTHER SERUM RESPONSE FACTOR HOMOLOG 2 129 - -
Mtr3g1835 132 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 2 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1835 Mtr-Chr3 30991386 30991784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1835 2 123 Type I MADS-box Gene Family AT5G48670 40.984 9.44e-29 105