Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1834 ATGGTTGATGAACTCATTACCCTATGTGGGATTGATGTATGCGCTATACTGTATAGCGGATATCATTCAGAGCCTGAGGTCTGGCCTTCCCCGTTGGAGGTTCAAAGGATTATCACAAAGTTCAAAAGTTATTCAGAAGTCGGGCAAGGAAGGAAGAAATTGAACCAAGAGAGCTATTTGATGGAGAGGATTGTGAAGTCAAAAGAGAAATTGGTGAAAGTGGAGAAAACCAATTGGGAGATGGAGAAATCCTTGATCCTGTTTGAATGTCTCCGACAAGAAAATTTTATCAACACTTTGAACACAAACGTTTTGAATGATCTGGCATGTGAAATTAATGAGAAGCTGAAAGAAATTACTTTGAAGATGAATCAGCTTGACACAAATGAAAGCACTTAG 399 0.3885 MVDELITLCGIDVCAILYSGYHSEPEVWPSPLEVQRIITKFKSYSEVGQGRKKLNQESYLMERIVKSKEKLVKVEKTNWEMEKSLILFECLRQENFINTLNTNVLNDLACEINEKLKEITLKMNQLDTNEST* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1834 132 PANTHER SERUM RESPONSE FACTOR HOMOLOG 2 129 - -
Mtr3g1834 132 SUPERFAMILY SRF-like 3 65 IPR036879 GO:0003677|GO:0046983
Mtr3g1834 132 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 2 129 - -
Mtr3g1834 132 Gene3D - 1 66 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1834 Mtr-Chr3 30985307 30985705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1834 2 123 Type I MADS-box Gene Family AT5G48670 40.984 2.02e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1834 - - mtr:MTR_3g466900 233.032