Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1829 ATGGGGGGCACAGGAAAAACTACATTGGCCAAAGAAGTGGGTAAGGAACTTAAGAAATCCAAACAATTTACCCACGTCATTGATACGACAGTGTCGTTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGATCCTTGGGATTGAATTTTTTTGACTGTAGTGAATCAGACCGACCCAAAAAACTATGGAGTAGATTAACCAATGGCGAGAAGATCCTTCTAATATTGGATGATGTGTGGTGGGGAGATATCAATTTTGATGAAATAGGGATTCCACATAGTGATAATCACAAAGGCTGTAGAATTCTTATAACCACACGCAATGTTTCGGTGTGCAACAAATTAGAATGCAGTAGGACAGTTCAACTAGAGCTCTTATCTGAAAAGGACGCATGGACCATGTTCAAAAGACATGCTGGTCTAAGTGAAATTTCAAATAAATATTTGCTCAACAAGGGCCGTAAAATTGCAAATGAGTGCAAAGGATTACCAATTGCCATTGCTGTTATTGCCAGTAGTTTGAAGGGTGAACAACGTCTTGAAGAGTGGGATGGCGCCTTAAACTCCTTGCAGAAACATATGTCCATGTATGGTGTTGATGATCAACTGGTGAAAATTCATAAATGCTTGAAGTTTAGCTATGATAATATGAAAAATGACTTTGCCAAGAGACTATTCCTCTTGTGTTCTGTATTTCGAGAAGATGAAGTAATCCCTATTGAAAGATTAATTAGACTTGGCATTGGAGCAGGCCTTTTTGGCGAAAATTATGGTAGTTATGAAGATGCTCGAACTGAAGTAGTTCAATCAACAAATAAACTCCTAGATTCTTGTTTATTGTTGCAGGCCAATAAAAATAGTGTGAAAATGCACGACTTGGTTCGTGACGCAGCCCAGCGAATATCTAACAAAGAGGTTCAAACAATAAAGTTGGATGATAAAAATCAAAACGCAATGGTTGAAAGGGAGAAGAATATCAAATATTTGCTATGCGAAGGCAAGCTAAATGATGTGTTTTCCTATAAGCTTGATGGTTCCAGGCTTGAGATTCTAATTGTCGTCGTGTATAAGGATGAAGACTACCATGATGTGAAAATCAATGTCCTTGATTCATTTTTTGAAAATAATAACGGCCTTCGAGTTTTTCATTTATTCTACAATTATCCTTCTTATTATCTAGGTTTCTCATTACCTCAATCAATTCAGTCTTTGAAGAATATTCGATCTCTTCTCTTTATGTATATCGATTTGGGTGATATCTCTATTTTGGGAAATTTGCAAAGTCTTGAGACACTTGAGTTGGATCAATGTATAATTAATGAATTGCCACATGGAATCACAAATCTAGAGAAACTCAGATTGTTGCAATTGGATTTGTGTGGAATTTTAAGGAACAATCCATTTGAGGTGATTAAAGGATGCTCATCCCTTGAAGAATTATATTTCACATGTAGTTTTAATGCTTTTTGTCGAGAAATTTCTTTTCCAAATGAATTGCGAAGGTTTTGTATCAGTGACGTATGGAGAAAATTGATCGATTCATCATCAAATTGTGTGTCTTTTGTAGACAAGATTGACATTTTCCTATCTGAAACAACACTCAAGTACTGTATGCAAGAAGCAGAGGTTCTTAGACTAACAAGAATGGAGGGGGGATGGAGAAACATCATACCTGAGATTGTTCCTATGGATCATGGTATGAATGATCTAGTCGAGCTTAATTTGATATCCATTTCACAGTTGCACTGCCTCATTGACACTCAGCATACTGATTCTCAATTTCCAAATGTCTTCTCCAAGTTGGTTGTACTAGATCTTTGGAACCTAGAAAATTTGGAAGAATTGTTCAATGGTCCTGTTTCCTTTGACTCTCTAAACAATTTAGAGAAGTTGTCCATCAAGAACTGTGAACATTTGCAGAGCTTATTTAAGTGCAAGCTAAACCTCTGCAATTTGAAGAGTGTGACATTGGAGGGATGCCCATTGTTGACCTCCCTATTTCAACCGTCAACTGCTCGTTGCTTAGTGTTGTTGGAGGTTTTGGAGATATTGGAATGTGAGTGTCTTGTAAACATAATAAAGGATGAAAGAAAAGAGGAGGAATTAAGCAGCGTAATAGTTGACGATAGTATTGATAGAAAGAGTCATGGCTCAATGTTGCCAAAACTCAAAGTTCTTACAATTGAGAACTGTCCAGAACTTGAATTTATATTTTCGTTTCCCTCGGCTCATGATCTTCCAGCAGTACAATCCATCAGAATAAGAAGTTGTGATAAGCTTAAATACATATTTGGCAAAAATGTCCCACTTGGTTCCCTTGAAACAATGAAGCTTGATGGCATACCAAATTTGATTGATATTTTCCCAGAATGTAACCATACCATGTCTACGTCCATTAAGGGACCATCTTATACTTCTGGAGATGCCTCCAAGCCACAAGCAGAATCAGGCCCAATGAAATGCAACATCTTTTCACAGACTGATATATATTGTTGTGGTAAAAAATTTGGGAACAAATTGAGGAGTACCACAAGTACTAACATCCCATTCGTTTCTCAGGATCAACGGCAGGACAACTTAATGGAATCAAATTCCTATTGCCTTAACATATGGGAACGTGCTCAATGTCTTTCAAGACAATCACATATCCTGTACAATATTAAAGAGATTAGGCTGGGATATATTTCAAAGATGAAATCTGTATTTATCCTATCTACTGCTCCAAGAATGTTGTTGGAGACTTTATGTATTAGCAACTGTGATGAATTGAAGCACATAATAGTAGACACAGGAGAAAATGACAGTGGTGGCAATAACTTGGGCAATGTCTTTCCAAAATTAAAATATCTATACATTGGAGATTGTGAGAAATTGGAATACATACTTGGACACTACACTCATGATCATCAAAATCTGCTTAAGATTGACCTTCATCTTTGCTCTTTGGAAAGTCTCAGTCTTTGCAATCTGCCAAGTTTAGTCGCAATATGTCCCAAACAATGTCACATAACATTTCCACCTTTGAAAAACTTCGAACTCAAAAACTGCTCGCAGGTTTCTACTGTCAAGTCTATTAGTGATTTCATAACTCATCATTCAGTAACAAGATTTGTCGACAATACAATCATCAAGGAATTGAGTGTAAATGTGGAGCATTTTATCTCTTTGAAAAGACTCATGGTAGAAAATAACTCCAAAGTAGAAAGTATATTTTGTCTCAATGAAGAGAAAATGAACTTAGGTTTTGAAGACATTGATTTGTATATTATGCCTATGATGACATTCCTATTTGTGGGTCCGAAAAATTCATTTTTCCTCCAAAACCTTACAAGATTAAAAATCATGCATTGTGAAAAATTGAAAACTGTTTTCTCCACTTCTATAGTAAGGTGTCTACCACAACTGCTTTTTATGAGAATTGAAGAATGCAAAGAGTTGAAGCATATAATTGAATATGATTTGGAGAACAAAAACTCCTCAAATTTTATTTCTACAAAGACATGCTTCCCAAAGCTTAAAACACTTATTGTAGTAAAGTGCAATCAGTTGAAATATGTCTTTCCAATGTCCATATGTAAAGAGCTTCCTGAGCTAGAGGTTCTAATCATAAGAGAAGCAGAGCTAGAGGAAATATTTGTAAGTGAAAAAGATGATCAGAAACTGGAGATTCCAAATCTAAAACTTGTAGTATTTGTAAATCTACCAAGCCTCTGTCATGTCCAGGGAATTCAACTCCAAGCTGTAAAACATCATTTGGTACAGAATTGTCAAAAACTAGTTTCAGCATCTACAGCAGACCTCGGAAATGATATTTATCGTTTTGAGCTTTGTTACGGTACACACTCTATCCAATCTTTCTGA 3867 0.3602 MGGTGKTTLAKEVGKELKKSKQFTHVIDTTVSFSPDIKKIQDDIAGSLGLNFFDCSESDRPKKLWSRLTNGEKILLILDDVWWGDINFDEIGIPHSDNHKGCRILITTRNVSVCNKLECSRTVQLELLSEKDAWTMFKRHAGLSEISNKYLLNKGRKIANECKGLPIAIAVIASSLKGEQRLEEWDGALNSLQKHMSMYGVDDQLVKIHKCLKFSYDNMKNDFAKRLFLLCSVFREDEVIPIERLIRLGIGAGLFGENYGSYEDARTEVVQSTNKLLDSCLLLQANKNSVKMHDLVRDAAQRISNKEVQTIKLDDKNQNAMVEREKNIKYLLCEGKLNDVFSYKLDGSRLEILIVVVYKDEDYHDVKINVLDSFFENNNGLRVFHLFYNYPSYYLGFSLPQSIQSLKNIRSLLFMYIDLGDISILGNLQSLETLELDQCIINELPHGITNLEKLRLLQLDLCGILRNNPFEVIKGCSSLEELYFTCSFNAFCREISFPNELRRFCISDVWRKLIDSSSNCVSFVDKIDIFLSETTLKYCMQEAEVLRLTRMEGGWRNIIPEIVPMDHGMNDLVELNLISISQLHCLIDTQHTDSQFPNVFSKLVVLDLWNLENLEELFNGPVSFDSLNNLEKLSIKNCEHLQSLFKCKLNLCNLKSVTLEGCPLLTSLFQPSTARCLVLLEVLEILECECLVNIIKDERKEEELSSVIVDDSIDRKSHGSMLPKLKVLTIENCPELEFIFSFPSAHDLPAVQSIRIRSCDKLKYIFGKNVPLGSLETMKLDGIPNLIDIFPECNHTMSTSIKGPSYTSGDASKPQAESGPMKCNIFSQTDIYCCGKKFGNKLRSTTSTNIPFVSQDQRQDNLMESNSYCLNIWERAQCLSRQSHILYNIKEIRLGYISKMKSVFILSTAPRMLLETLCISNCDELKHIIVDTGENDSGGNNLGNVFPKLKYLYIGDCEKLEYILGHYTHDHQNLLKIDLHLCSLESLSLCNLPSLVAICPKQCHITFPPLKNFELKNCSQVSTVKSISDFITHHSVTRFVDNTIIKELSVNVEHFISLKRLMVENNSKVESIFCLNEEKMNLGFEDIDLYIMPMMTFLFVGPKNSFFLQNLTRLKIMHCEKLKTVFSTSIVRCLPQLLFMRIEECKELKHIIEYDLENKNSSNFISTKTCFPKLKTLIVVKCNQLKYVFPMSICKELPELEVLIIREAELEEIFVSEKDDQKLEIPNLKLVVFVNLPSLCHVQGIQLQAVKHHLVQNCQKLVSASTADLGNDIYRFELCYGTHSIQSF* 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1829 1288 Pfam NB-ARC domain 1 218 IPR002182 GO:0043531
Mtr3g1829 1288 Gene3D Ribonuclease Inhibitor 706 802 IPR032675 -
Mtr3g1829 1288 PANTHER - 1107 1230 - -
Mtr3g1829 1288 PANTHER - 870 959 - -
Mtr3g1829 1288 PANTHER - 7 793 - -
Mtr3g1829 1288 Gene3D Ribonuclease Inhibitor 867 1272 IPR032675 -
Mtr3g1829 1288 SUPERFAMILY L domain-like 891 1243 - -
Mtr3g1829 1288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 231 IPR027417 -
Mtr3g1829 1288 SUPERFAMILY L domain-like 291 791 - -
Mtr3g1829 1288 Gene3D - 127 220 IPR042197 -
Mtr3g1829 1288 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 870 959 - -
Mtr3g1829 1288 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 7 793 - -
Mtr3g1829 1288 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1107 1230 - -
Mtr3g1829 1288 Gene3D - 1 124 IPR027417 -
Mtr3g1829 1288 PRINTS Disease resistance protein signature 68 82 - -
Mtr3g1829 1288 PRINTS Disease resistance protein signature 162 176 - -
Mtr3g1829 1288 PRINTS Disease resistance protein signature 720 736 - -
Mtr3g1829 1288 Gene3D Ribonuclease Inhibitor 348 705 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1829 Mtr-Chr3 30915666 30926012 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1829 1 485 WRKY Transcription Factor Family AT5G45050 23.137 1.77e-14 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1829 - - mtr:MTR_3g062420 1667.51