Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1825 ATGACGAGTATCCTAGAGGACTGGGGGAAGAAATTGTTAGAGAAATTGATAAAGAGAACAATAGACGAAGCACGTTTTCTGTTTTGCTTCACATGCATTGCTAAGGAATTCGAAGAAGAAAGGGCTAACTTGCAACCAGAAAGGGAAACTTTGGAGCAACATGTCAAAGAAGCAAAAGGAAGAAATAAAGATATTGCAGCTAATGTTGTTTCGTGGGAAGAGGATGTTAAGAAGCTCTTTCAAGAGGACACCAAAGCAAACCAAACTTGTTTTTTTGGATTTTGTCCTGATTGCATATGGCGGTATAGAAGGGGAAAGAAATTGACAAAAGATATCGAGAAGATTAAAGGACTAATAGAGAAGGCAGATAAATTTGGAAATATTGAAGTTTCTCGCCCTCCTCCAGGTGTTGAACACAAGTCATCACAAGATTACATTTCTTTTGAAAGCAGGTTGTCTGAATACAAAGAACTGTTGGATGCACTGAAAGATGACAACAACTATATAACCGGATTGCAAGGGATGGGTGGCACCGGAAAAACTACTTTGGCCATAAAAGTGGGTAAAGAACTAAAGGAATCTGGACAATTCACTTGTGTCATTGATACAACAGTGTCGTTTACTCCTGATATAAAAAAGATTCAAGATGACATTGCTGGACCTTTAGGATTGAAATGGGAGGATTGTAATGAATCAGAACGGCCTAGAAAACTATGGGACAGATTAACAAAGGGTGAGAAAATTCTTCTAATATTGGATGACGTGTGGGATCAAGACCCACTTCTTGATTTTGGTGCAATAGGGATTCCAAAACGGGACAATCACAAAGGCTGTAGAGTTCTTGTAACCACACGTAGTAAACAACTATCCAACAGAATGAATTTTGATAAGAGTATTGAACTGAATCCTTTATCTGAAGATGACGCGTGGATCATGTTCAAACGGTATGCCAATATAAGTGAAAGTTCCTCAAAAGATTTGGAGAATAAAGGACGTGAAATTGCAAAGGAATGCAAACAATTACCAGTTGCAATTGCAGTTATTGCCCCTAGTTTAAAAGGCCAACAAAATCGGGTGGAAAAATGGGATGCAATACTAACATCCTTGAAGAAACATGTACCCACAAATGATGTTGAAGCTGACGTTGTTGTAATTTATAAATGTTTGAAGGTTAGCTATGATAATATGAAGGATCGAAAGGCCAAGGAATTGTTCCTCTTATGTTCTTTATTCCGAGAAGATGAAGAAATTTCTATCGAAGTTCTAACCAGAATTGCCATAGGAGCTGGTCTTTTTGGAAAAGATTATGGCACCTACGATGATGCTCGAATAAATGTAGCTGTATCCAAATATGACCTCGTTGATTCTTGTTTGTTGTTGGAGGTTGACAAAAAACATGTAAAAATGCATGATTTAGTTCGTGATATGGCTCAACGGATAGCGAGCAAAGAGATTCGAGTAGTTAATTTGTCCAAGAAAAAGTCGTTGGTTGAATGGGACGTAAACATTAGATATTTATCCTTTGAAGGGAATAAAATTGATTTGTTTTCTTGTAAGTTCGATGGTTCTAAACTTAAGACTTTAATTGTCAACATAGAAAGAGATGAAGACTGTGTATGTCATGGATGTTGTGCATGTCTGGAAGTGCCTGATTCATTCTTTGAAAATATTGTTGGGCTTCAAGTTTTACATTTTTCAAGTAATGTTCCACGACAGATATCATTACCAAAGTCGTTTCAATTATTGGCAAATATTCGATCTCTGTTCGTCAATTGTGTCGATTTAGGTGATATCTCTGTTCTGGGAAATCTGCAAAGTCTTGAGGCTCTTGAATTGGTTAAATGCACAATCCATGAGTTGCCAATTGAAATTGGAAAACTGGAGAACTTGAAACTGTTGAGGTTGGAAACTTGTGAAATTAGAAAGGATAATCCATTTGAAGTTATTAAAAAATGCTCATCACTTGAAGAGTTGTATTTCATATACAGTTTTAATGATTTCTGTCGGGAAATTACTCTACCTGCTAAGTTGCGAAGGTATCATATTGCTGTATGGATAAGGGAGAATGAAATGGTTTTTACAAAACATGTGGTTCTTGATAAGAAAGTTTTTGGGTATTTTACAAAAGGAACACTCGAGTATTTTATGGAAACAGCAGAGGCTATTGAGCTATTTGGAATTAACAGTGGATGGAGAAATCTCATGCCTGAGGTGGTTCCTATAGAAAATGGCATGAATGATCTTGTTAAGCTTCACCTGTCATGGGGTTCAGAACTACAGTGCCTCATAGACACTAAACATATTGATTCTCAAGTACCAAATGTTGTCTTCTCCAAGTTGGTTGTACTAGAGCTCTTTAAAATGGATAAGTTGGAAGAATTGTGCAACGGTTCCATCTCCATGGACTCTCTGAACTGTTTAAAGGAGGTAACTATTGAGTCCTGTGAACATTTGCAAAGCTTGTTTAAATGCAGCCTAAATCATCTCTGCAATCTAAAGAATGTGACACTTACTTCATGCTCAACATTGATTTCTGTTTTTGATTTGACATCATCGCAAGGCCTTCCCCAGTTAGAGAGCTTGAACATTAATTTTTGTTCGAAATTAGAAAACATATTTACATACGAAAGGTTGCAATTCAATGATAACAGCAAGAGTTGCAACTCAATGTTTCCAAACCTGAAAGTTCTCAGTATTTATCAATGCCCTCAATTACAATTTATACTTCCATATCACTCTGCTGGAAACCTTTTGTCACTAGAATCTATCATGATACAAAGTTGTGATAAGCTGACACAATTGATTAAACCCGCCTTGGATGATACGATCGAGGAAAAAGTCAAAGGTGATAATGATAACAACAATAGTTGCAACTCAATAATGTTTCCAAACCTGAAAGGTGTACAGGTAATTAGCTGTCCCCAATTACAATTTGTACTGCCACTTCAGTCTGCTCAAGACCTTTTGTTACTACAATCTGTCACAATAATGGAATGTGATAAGCTGAAACACATATTTGGTCAACACCAAGATGTCCAACTCGCTTTACTAGAAAAATTGTACCTTGTTGATTTGCCAAACTTCATCAACATATTTCCAGAATCTGATCATTCCATGCCTTCATCCATTAAAAGGTCATCTAATTCTATTTCCAAAACACAAACAAAGTTGGAGCCAGTAAAATCAAATATATTCTCTTGGAGCCATATCTGTTGTCATAGATACAAATTCAGGGCCTCCACAAGTACTGAAATCTCATTGGAACGTCAACATTGTCTTTCAAGACTATCACATATCATGTGCAATATTAAAGTGATATCACTGAGTAACCTCTCAAAGATAAAGTCAGTATTTGTCCTATCTATGACTTCAAGAATGATGTTGGAGAGCTTGACTATTGAAAACTGTGATGAATTGAAGCACATAGTAGTAGACATTGGAGATAGCAGTGGCAGTGACAATAGTGTCTTCCCAAAATTGAAAAGGCTCGAAGTTAAAAATTGTGGGAAATTAGAATACATATTTGGGCACATTGATGATAGTGATGATCATCAAAACCACAATCTTCATCTTCCAGCTTTGGTGGAACTTGAACTCATCAATTGCAGCCAGCTTGTTCTTAAATATATTGGTGATTTGATTGTCAAGGAATCGAGCGGGAATGTGGAGCATTTTGTCGCTTTGGAAAAGTTGAAGGTAGAAAATTCCAATGTTGAAAGTATATGTTGTCTCAATGAAGTAAGTGAGCGGGAGATGAACTTGGGATTGCAAAACATTGAGTTATATACTCTACCTATGTTGACATGTCTTTTTAAGGGTCTAAAAAAATCTTTTTACCTCAAAAACCTTACTAAGATGAAAATTAAGGGATGTGAAAAATTGGAAATTGTTTTCTCTACTTCTATAATAATGTGCCTACCACAGTTGCTTCACATAATAATTAATGACTGCAAAGAGTTGAAGCATTTGATTGAAGATGATTTGGAGAATAGAAAGATTGTACGCTTCCCAAAGCTCAAAACAGTTGTTGTAGAAAAGTGCAAAATGTTGAAATATGTGTTTCCAATCTCCATATGTAAAGAGCTTCCTGAGCTAAAGGTTCTGATCATAAGAGAAGCAGATGAGCTAGAGGAAATATTTGTATGCGAAGTTGATGAGAAAGTCAATATTCCAAATCTGAAATTTGTAGCATTTGTCAACCTACCAAGCCTCAGCCAGACCCAAGGAATTCATTTTCAAGCAGCACCATATCGTTTTATACAAAGTTGTCGAGAACTCTCTCTGACTTCAGCAATAACAAAAGATGTCAGTAGTTACACTCTTTTTAACGATTATTGGGAGGAAGATTTTGATTTGTACGAGGATATCAAGAATGTAGCTGCTGAATTACTAGAAAATCCAAGGATTGAAGTTCATGCAGCATCAGGACACATGTTCACTTCTTCACAGGAATTGACGAACCAACAGCATTTACAAGGAGAAATTGATGCCAGCATCAAACCTTTTCATGGAAATAATAATTTGGAGGGTTCACCGTCAGAAAGACTTGTAGCAGAATCTTTGTCCACCATACAAGTCATTGATAGTAAACAAAAGGCATTTCCTCTATTTTGCCTGTATTTTTTCTGA 4629 0.364 MTSILEDWGKKLLEKLIKRTIDEARFLFCFTCIAKEFEEERANLQPERETLEQHVKEAKGRNKDIAANVVSWEEDVKKLFQEDTKANQTCFFGFCPDCIWRYRRGKKLTKDIEKIKGLIEKADKFGNIEVSRPPPGVEHKSSQDYISFESRLSEYKELLDALKDDNNYITGLQGMGGTGKTTLAIKVGKELKESGQFTCVIDTTVSFTPDIKKIQDDIAGPLGLKWEDCNESERPRKLWDRLTKGEKILLILDDVWDQDPLLDFGAIGIPKRDNHKGCRVLVTTRSKQLSNRMNFDKSIELNPLSEDDAWIMFKRYANISESSSKDLENKGREIAKECKQLPVAIAVIAPSLKGQQNRVEKWDAILTSLKKHVPTNDVEADVVVIYKCLKVSYDNMKDRKAKELFLLCSLFREDEEISIEVLTRIAIGAGLFGKDYGTYDDARINVAVSKYDLVDSCLLLEVDKKHVKMHDLVRDMAQRIASKEIRVVNLSKKKSLVEWDVNIRYLSFEGNKIDLFSCKFDGSKLKTLIVNIERDEDCVCHGCCACLEVPDSFFENIVGLQVLHFSSNVPRQISLPKSFQLLANIRSLFVNCVDLGDISVLGNLQSLEALELVKCTIHELPIEIGKLENLKLLRLETCEIRKDNPFEVIKKCSSLEELYFIYSFNDFCREITLPAKLRRYHIAVWIRENEMVFTKHVVLDKKVFGYFTKGTLEYFMETAEAIELFGINSGWRNLMPEVVPIENGMNDLVKLHLSWGSELQCLIDTKHIDSQVPNVVFSKLVVLELFKMDKLEELCNGSISMDSLNCLKEVTIESCEHLQSLFKCSLNHLCNLKNVTLTSCSTLISVFDLTSSQGLPQLESLNINFCSKLENIFTYERLQFNDNSKSCNSMFPNLKVLSIYQCPQLQFILPYHSAGNLLSLESIMIQSCDKLTQLIKPALDDTIEEKVKGDNDNNNSCNSIMFPNLKGVQVISCPQLQFVLPLQSAQDLLLLQSVTIMECDKLKHIFGQHQDVQLALLEKLYLVDLPNFINIFPESDHSMPSSIKRSSNSISKTQTKLEPVKSNIFSWSHICCHRYKFRASTSTEISLERQHCLSRLSHIMCNIKVISLSNLSKIKSVFVLSMTSRMMLESLTIENCDELKHIVVDIGDSSGSDNSVFPKLKRLEVKNCGKLEYIFGHIDDSDDHQNHNLHLPALVELELINCSQLVLKYIGDLIVKESSGNVEHFVALEKLKVENSNVESICCLNEVSEREMNLGLQNIELYTLPMLTCLFKGLKKSFYLKNLTKMKIKGCEKLEIVFSTSIIMCLPQLLHIIINDCKELKHLIEDDLENRKIVRFPKLKTVVVEKCKMLKYVFPISICKELPELKVLIIREADELEEIFVCEVDEKVNIPNLKFVAFVNLPSLSQTQGIHFQAAPYRFIQSCRELSLTSAITKDVSSYTLFNDYWEEDFDLYEDIKNVAAELLENPRIEVHAASGHMFTSSQELTNQQHLQGEIDASIKPFHGNNNLEGSPSERLVAESLSTIQVIDSKQKAFPLFCLYFF* 1543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1825 1542 Gene3D - 137 299 IPR027417 -
Mtr3g1825 1542 PRINTS Disease resistance protein signature 169 184 - -
Mtr3g1825 1542 PRINTS Disease resistance protein signature 242 256 - -
Mtr3g1825 1542 PRINTS Disease resistance protein signature 338 352 - -
Mtr3g1825 1542 PRINTS Disease resistance protein signature 853 869 - -
Mtr3g1825 1542 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 59 907 - -
Mtr3g1825 1542 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 915 1034 - -
Mtr3g1825 1542 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 408 IPR027417 -
Mtr3g1825 1542 Gene3D Ribonuclease Inhibitor 1012 1210 IPR032675 -
Mtr3g1825 1542 Gene3D Ribonuclease Inhibitor 455 682 IPR032675 -
Mtr3g1825 1542 SUPERFAMILY L domain-like 468 980 - -
Mtr3g1825 1542 Coils Coil 34 68 - -
Mtr3g1825 1542 Gene3D Ribonuclease Inhibitor 1211 1426 IPR032675 -
Mtr3g1825 1542 Gene3D - 303 397 IPR042197 -
Mtr3g1825 1542 Gene3D Ribonuclease Inhibitor 718 943 IPR032675 -
Mtr3g1825 1542 SUPERFAMILY RNI-like 1092 1398 - -
Mtr3g1825 1542 Coils Coil 145 165 - -
Mtr3g1825 1542 Pfam NB-ARC domain 157 395 IPR002182 GO:0043531
Mtr3g1825 1542 PANTHER - 59 907 - -
Mtr3g1825 1542 PANTHER - 915 1034 - -
Mtr3g1825 1542 SMART AAA_5 166 305 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1825 Mtr-Chr3 30844975 30878281 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1825 171 506 WRKY Transcription Factor Family AT5G45050 26.453 8.23e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1825 - - mtr:MTR_3g466620 1629.77