Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1822 ATGGAGTGTTTCCTGACAGAGTTGGGGAAGACACTTATGGAGAAAGTGCTAAACAAGGCAATAGAAAAATCACGCAATATATTTTGCTTCACATGCATTGTTAAAGAATTCAATGAAGAAAAGGATAAGTTGGAAGAAGGAAGGGCAACTATGAAGGAACAAATTCAAGTGGCCACCAATAAAGGAAAAGGTATCAAAGCTAATGCTCGATTATGGGAAGAACATGCTCGAAAGCTCATTCAAGAGAACACCGAGACAAAACAAAGTTGTTTTTTTGGATTTTGCCCTGATTGTATTTGGAGATATAAAAGGGGAGAGGAGTTGACAACAAAGATAAAAGAGATTAAAGATTTGATGGTAAAGGGGGAGAAATTTGAAAATGTTGAACTTGATCGTCCTCTTCCAGGTGTTGAGCGTTATTCTTCTCAATATTACATTTCTTTTAAAAGTAGAGAGTTGAAATGTGAAGAGCTTTTGGCTGCACTACGAGATGAAAGTAATTATATAACCGGATTGCACGGAATGGGGGGCACAGGAAAAACTACATTGGCAAAAGAAGTGGGTAAACAACTTAAGACATTGGAGCAATTCGATCATGTCATCGATACCACAGTGTCAGTTACTCCTGTTATAAAAAAGATTCAAGATGATATTGCTGGACCCTTAGGATTGAAATGGGAGGACACCACTAAATCAGACCGACCTAAAAAGTTGTGGAGCAGATTAACCAATGGTGAGAAAATTCTGCTGATATTGGATGATGTGTGGAGAAATCTCAATTTTGATGACATAGGGATTCCAAATAGAGATAATCACAAAGGATGCAAATTACTTATAACCACACGCAATCTGAGGGTATACAATCAAATGGTATGTGAAAACACAATTGAGCTAGATCCCTTGAATGAAGAAGAAGCATGGACCATGTTTAAATTGCATGCCGATCTAACTGATATTTCCCCCAAAAGTATCCTTGACAAGGGACGTAAAATTGCAACTGAATGCAAATGTTTACCAGTTGCAATTGCTACTGTTGCTAGCAGTTTGAAGGGACAAGAATGTCGTGAAGAGTGGGATGTTTGCTTACAGACCTTACAGAAACCATTGTCCAAGGGCAGTGTTCATAATGACTTGGTTTATATTTATAAATGTTTGAAGTTTAGCTATGACTTTCTGAAGGATAAAAAGGCCGAGGGCCTTTTCCTTTTATGTTCTACATTCCCAGAAGATGAAGAAATTTCAACCGAAGTTCTAACTAGGCTTGGCATAGGAGTTGGCCTTTTTGAGGATGTTTATGGTAGTTACGAAGATGCTCGAAGTCAAGCAGTTGCATCAAAAAAGAAACTCTTAGATTCATGTTTATTGTTGGAGACAGAGAAAGGAGATGTGAAAATGCATGACTTGGTTCGTGAAGTAGCACAATTGATAGCAAAGAATGAGATTAAGATAGTAAATTTTTCCAACAAAAGTCAAAAGTCACTGGTTGAAAGCGATAAGAAAATCAAATATTTGATATGTGAAGGAGATCTTAGGGATTTATTTGCATTTAAGTTTGATGGTTCTGAACTTGAGATTCTAATTGGCAACATGCATATGGAGGACATTTTGCACATCCCCATTTCATTCTTTGAAAATATTCCAAGGCTTCGTGTTTTGAATTTATCATGCCATAATTCTTATCATCATCCTCTATCGTTACCACAATCAATGAAGCCATTGTCGAATATTCGTTCTCTATCATTTGAAAGTGTTGATTTGGGTGACATTTCTGGTTTTGGAGGCCTGCAAAGTCTTGAGACTCTTGAGTTGACTAAATGTACAATTGATGAACTTCCTCGTGAAATTGAAAAACTGGAGAATTTTAGATTGTTGGAGTTGAAAAATTGTAAAGTTAGAAATAATGACCCATTTGAAGTAATCCAAAGATGCACATCACTTGAAGAATTGTACTTCATGAATAGTTTCAATGATTCTTGTAAGGAAATAACCTTACCAACATTGCAAAGGTATTTTCTCAAAGATGTCACCGGTTATGCTTATATGATGAAATATACAATATCAAGAGGTGTGTCTTTTGAATGGGATTATTTATCAGAAGCAACATTTAAGTATGTGATGGAAACAGCAGAGGTTCTTCATTTGAAAGGAACCAACAAGGGATGGAGAAATCTCATGCCTGGGATTCTTCCTATAGATAATGGTATGAATAATCTAATTGAGCTTGTTTTGAAAAATTGTCATCAAGTACAATGCCTGGTAGACACGAAACATAATAATTCTGAAGTACCAAGTGTCTTCTCCAAGTTGGTTGTACTAAAACTCAAGGAAATGAAGAATTTGGAAGAATTATGCAATGGTCCCATCTTCTCTGACTCTATGAACAATTTAGAGGAGCTAACAATCCAAAAATGTGGAATTTTGCGAAGCTTGTTTAAATGCAGCATAAATTTCTGCAATCTAAAGAACGTGACCATATATTCATGTCCTATGCTGGTTTCTGTTTTTGATCTGTCAACTTCTCGAGGCCTGCCGCTGTTGGAGAAATTGCGCATAGATGATTGTGAGCAGTTGGAAAACATAATTACAACTGAATGTGAAGAAATAGTTGATGGTGATAATGATAATAACGATAGTTACAACTCAATGTTTCCAAATCTGAAATTTCTCAATATTATTCGATGCCCCAAATTACAATTTGTACTTCCATGTTACTATGCTGGAGACTTTTTGTTACTAGAATCTATATGGATACAAAATTGTGATGAGCTGGAATACATATTTGGCCAACACCAAGATGTTCAACTCGCTTCACTAAAAGAATTGAAGCTTGATCATGTGCCAATTTTCATCGACATATTTCCAAAGCCTTCATTCAATAGATATCTAGCACAAATGTCTTATATTTATCGGTAG 2913 0.3601 MECFLTELGKTLMEKVLNKAIEKSRNIFCFTCIVKEFNEEKDKLEEGRATMKEQIQVATNKGKGIKANARLWEEHARKLIQENTETKQSCFFGFCPDCIWRYKRGEELTTKIKEIKDLMVKGEKFENVELDRPLPGVERYSSQYYISFKSRELKCEELLAALRDESNYITGLHGMGGTGKTTLAKEVGKQLKTLEQFDHVIDTTVSVTPVIKKIQDDIAGPLGLKWEDTTKSDRPKKLWSRLTNGEKILLILDDVWRNLNFDDIGIPNRDNHKGCKLLITTRNLRVYNQMVCENTIELDPLNEEEAWTMFKLHADLTDISPKSILDKGRKIATECKCLPVAIATVASSLKGQECREEWDVCLQTLQKPLSKGSVHNDLVYIYKCLKFSYDFLKDKKAEGLFLLCSTFPEDEEISTEVLTRLGIGVGLFEDVYGSYEDARSQAVASKKKLLDSCLLLETEKGDVKMHDLVREVAQLIAKNEIKIVNFSNKSQKSLVESDKKIKYLICEGDLRDLFAFKFDGSELEILIGNMHMEDILHIPISFFENIPRLRVLNLSCHNSYHHPLSLPQSMKPLSNIRSLSFESVDLGDISGFGGLQSLETLELTKCTIDELPREIEKLENFRLLELKNCKVRNNDPFEVIQRCTSLEELYFMNSFNDSCKEITLPTLQRYFLKDVTGYAYMMKYTISRGVSFEWDYLSEATFKYVMETAEVLHLKGTNKGWRNLMPGILPIDNGMNNLIELVLKNCHQVQCLVDTKHNNSEVPSVFSKLVVLKLKEMKNLEELCNGPIFSDSMNNLEELTIQKCGILRSLFKCSINFCNLKNVTIYSCPMLVSVFDLSTSRGLPLLEKLRIDDCEQLENIITTECEEIVDGDNDNNDSYNSMFPNLKFLNIIRCPKLQFVLPCYYAGDFLLLESIWIQNCDELEYIFGQHQDVQLASLKELKLDHVPIFIDIFPKPSFNRYLAQMSYIYR* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1822 970 Pfam NB-ARC domain 156 390 IPR002182 GO:0043531
Mtr3g1822 970 Gene3D - 300 387 IPR042197 -
Mtr3g1822 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 394 IPR027417 -
Mtr3g1822 970 Gene3D - 388 475 IPR036388 -
Mtr3g1822 970 Coils Coil 34 61 - -
Mtr3g1822 970 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 52 955 - -
Mtr3g1822 970 PRINTS Disease resistance protein signature 169 184 - -
Mtr3g1822 970 PRINTS Disease resistance protein signature 242 256 - -
Mtr3g1822 970 PRINTS Disease resistance protein signature 335 349 - -
Mtr3g1822 970 PRINTS Disease resistance protein signature 593 609 - -
Mtr3g1822 970 Gene3D Ribonuclease Inhibitor 520 949 IPR032675 -
Mtr3g1822 970 SUPERFAMILY L domain-like 463 955 - -
Mtr3g1822 970 PANTHER - 52 955 - -
Mtr3g1822 970 Gene3D - 138 297 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1822 Mtr-Chr3 30818836 30826106 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1822 170 629 WRKY Transcription Factor Family AT5G45050 21.807 7.33e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1822 - - mtr:MTR_3g451650 1413.28