Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1817 ATGCCGGAGATCGAACGAGCGTCACCGGATGTAGCAGCGGTAACATCTATTTTTGGAAAATATGAATTAGGAAGAGTTGTTGGTTGTGGCGCTTTCGCGAAAGTGTATTATGCACGTAATGTTCAAACGGGGCAAAGCGTGGCTGTGAAGATAATCAACAAAAAGAAACTCAAAGGCACAGGTCTAGCCGAAAATGTGAAACTCGAAATCATAATCATGAGTCGTCTTCATCATCCTCATATTGTTCGTCTTCACGAAGTTCTTGCCACCAAGACGAAAATCTATTTTGTTATGGATTTTGTTCGTGGTGGCGAGCTTTTCGCGAAGATATCAAAGGGTAGGTTTAGCGAAGATCTTAGCCGGAGATATTTTCATCAATTAATCTCGGCTGTTGGTTATTGTCATTCACGAGGGGTTTTTCATCGGGATCTTAAGCCGGAGAATTTGTTATTAGATGAAAATGGGAATTTAAAAGTTTCGGATTTCGGGTTAAGTGCAGTCACAAATCAGATCCGATCCGATGGATTGCTTCATACTCTTTGTGGAACCCCTGCTTACGTGGCACCTGAGGTTCTTGCTAAGCGAGGATATGATGGTGCCAAAGTTGATGTTTGGTCATGTGGCGTTGTTTTGTTTGTCCTTGCGGCGGGATATCTTCCTTTTAATGATCAAAATTTAATGGTTATGTATCGGAAAATTTATAAAGGTGAATACAAGTGTCCACGTTGGATGTCGCCGGGTCTCCAAAGATTTTTGTCAAAATTACTTGATACAAACCCGGAAACCCGGATCACAATTGATGGTATGACCCGGGATCCATGGTTTAGAAAAGGGTACAAGGAGATAAAATTTCATGAGGAAGATTATGGATATGGGCATGGGTTTGGGTTCAAGTGTAGATGTGATGGATCAAAGGTATTGAATTTGAATGCGTTTGATATTATATCATTTTCTTCCGGTTTGAATTTATCTGGATTGTTCGGGAAATTTGATGGGTCAGAGCGGTTTGTTGTAAGGGAGTCGCCGAAGAGGATTTTAAAGGTGGTGAAGAAAATAGGAGTGGCAGAGGGAATGGCGTTGAGGTGGAAGAAAGAATGTGGGGTAGAGTTGGAAGAGTTGAATGGTAAATTTGGAATTGAGATTGAGGTTTATCGGTTAACGGAGAAGGTGGCGATGGTTGAGGTACGGAGGAGAGGAAATAATGCGGCGACTTTTAGTGATTTGTGGAATAATAAGCTTAAACCTCAGTTGCTACTATGTGGTGCAACGACATCACATTTAGATGAACGTGAACCTGAATCATCACATTCGAATGAACGTGAACCTGAATAA 1332 0.4144 MPEIERASPDVAAVTSIFGKYELGRVVGCGAFAKVYYARNVQTGQSVAVKIINKKKLKGTGLAENVKLEIIIMSRLHHPHIVRLHEVLATKTKIYFVMDFVRGGELFAKISKGRFSEDLSRRYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVTNQIRSDGLLHTLCGTPAYVAPEVLAKRGYDGAKVDVWSCGVVLFVLAAGYLPFNDQNLMVMYRKIYKGEYKCPRWMSPGLQRFLSKLLDTNPETRITIDGMTRDPWFRKGYKEIKFHEEDYGYGHGFGFKCRCDGSKVLNLNAFDIISFSSGLNLSGLFGKFDGSERFVVRESPKRILKVVKKIGVAEGMALRWKKECGVELEELNGKFGIEIEVYRLTEKVAMVEVRRRGNNAATFSDLWNNKLKPQLLLCGATTSHLDEREPESSHSNEREPE* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1817 443 Gene3D Kinase associated domain 1, KA1 305 419 - -
Mtr3g1817 443 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Mtr3g1817 443 Gene3D Transferase(Phosphotransferase) domain 1 12 291 - -
Mtr3g1817 443 SUPERFAMILY Protein kinase-like (PK-like) 17 283 IPR011009 -
Mtr3g1817 443 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1817 443 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Mtr3g1817 443 CDD CIPK_C 310 417 - -
Mtr3g1817 443 MobiDBLite consensus disorder prediction 426 443 - -
Mtr3g1817 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Mtr3g1817 443 MobiDBLite consensus disorder prediction 424 443 - -
Mtr3g1817 443 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1817 443 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 442 - -
Mtr3g1817 443 Pfam NAF domain 308 360 IPR004041 GO:0007165
Mtr3g1817 443 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1817 443 PANTHER - 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1817 Mtr-Chr3 30640258 30641869 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1817 1 425 CBL-interacting serine-threonine protein kinases AT2G30360 62.069 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr3g1817 Pkinase 1.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1817 - K12761 gsj:114377188 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1817 3 30640258 30641869 Mtr3g1817 3 30640258 30641869 ECH
Mtr3g1817 3 30640258 30641869 Mtr5g2534 5 33196651 33198700 PCT