Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1813 ATGGAGAGTGATATGAAACCGAATGTGTTGATGGAACGATACGAGTTAGGAAGGTTACTTGGTCAGGGAACTTTTGGAAAGGTTTACTATGCACGGAGTACGGTAACTAACCAGAGTGTCGCCATTAAAGCGATTGAAAAGGATAAAGTTATGAGAACCGGTCAAGTTGATCGAATCAAGCGTGAAATATCTGTTATGAAATTGGCTAGGCATCCGAATATTATACAGCTTTTTGAAGTTATGGCAACTAAGAGTAAGATTTACTTTGTTATGGAGTATGCAAAAGGTGGTGAGCTCTTCGACAAGGTGTGTAAAGGAAGACTCAAAGAAAAGGTTGCGCACAGATATTTTAAGCAGTTAATCAATGCAGTCGATTTTTGTCACAGTAGAGGTGTGTATCATCGAGACATTAAGCCTGAAAACGTTCTGTTGGATGAAAATGGGAATCTAAAGGTTTCTGATTTCGGGTTAAGTGCTCTTGTGGAATCAAATCAACAGGATATCATCCTCCGCACGCCTTGCGGCACTCCGGCCTATGTTGCTCCAGAAGTCATCAAAAGAAAAGGGTATGACGGTGCCAAAGCCGATATTTGGTCTTGTGGAATAGTTCTGTTTGTTTTATTGGCAGGTTATCTTCCTTTTCATGACTCAAATTTGATAGAGATGTATAGGAAGATACACAAAGCAGAACTAAAATGTCCTGGTTGGTTTCGACCGGAAGTGTGCAAGCTATTAAGCGATATATTGGATCCTAATCCCGACACTAGGATTTCCATAGAAAAGATTAAGGAACATTGTTGGTTTAAAAATGAACTAACTGCAAGAAACAAAAAACAACTGTTGGAAAATAACACTGTCTCTTCTTCGAGTTCAGTTGTTTCTGATCAAAATGATGAAAATGACGGCCCAGAATCCGAGGCAAAGGAAGAGTCGGTTGTACCAATCAGTATAAATGCATTTGACATCATCTCCCTTTCAGCTAGTTTTGATCTTTCAAGATTCTTTAAAGACGGTGTTCAGAAAAGAGAAGCCAGGTTTAGTTCAAAACTACCTGCATCAGTCATCATCTCGAAGATAGAAGACATTGCTAAGCAACTGAGGATGAAAATTAAGAAAAAAGCTGCTGGTTTGTTGAAACTAGAGGGATTTGATGAAGGTAGGAAAGGGGTTTTATCCATTGATGCGGAGATTTTTGAGGTTACACCAAATTTCCATTTAGTTGAGGTGAAAAAATCAAATGGAGATACATTGGAATATCAGAAAATATTGAAAGAGGATATAAGACCTGCTCTTCAAGATATTGTTTGGGTGTGGCAAAGTGACCAACAGCAGCAGTCACAACAGTCAGATCAACAGCTACAGATACATGACCAGCAGCAACGACAACCACAATCATAA 1398 0.3913 MESDMKPNVLMERYELGRLLGQGTFGKVYYARSTVTNQSVAIKAIEKDKVMRTGQVDRIKREISVMKLARHPNIIQLFEVMATKSKIYFVMEYAKGGELFDKVCKGRLKEKVAHRYFKQLINAVDFCHSRGVYHRDIKPENVLLDENGNLKVSDFGLSALVESNQQDIILRTPCGTPAYVAPEVIKRKGYDGAKADIWSCGIVLFVLLAGYLPFHDSNLIEMYRKIHKAELKCPGWFRPEVCKLLSDILDPNPDTRISIEKIKEHCWFKNELTARNKKQLLENNTVSSSSSVVSDQNDENDGPESEAKEESVVPISINAFDIISLSASFDLSRFFKDGVQKREARFSSKLPASVIISKIEDIAKQLRMKIKKKAAGLLKLEGFDEGRKGVLSIDAEIFEVTPNFHLVEVKKSNGDTLEYQKILKEDIRPALQDIVWVWQSDQQQQSQQSDQQLQIHDQQQRQPQS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1813 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Mtr3g1813 465 Pfam NAF domain 314 372 IPR004041 GO:0007165
Mtr3g1813 465 ProSiteProfiles Protein kinase domain profile. 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1813 465 MobiDBLite consensus disorder prediction 286 310 - -
Mtr3g1813 465 PANTHER - 5 455 - -
Mtr3g1813 465 Gene3D Kinase associated domain 1, KA1 315 437 - -
Mtr3g1813 465 Gene3D Transferase(Phosphotransferase) domain 1 100 314 - -
Mtr3g1813 465 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Mtr3g1813 465 Pfam Protein kinase domain 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1813 465 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Mtr3g1813 465 SUPERFAMILY Protein kinase-like (PK-like) 10 302 IPR011009 -
Mtr3g1813 465 Gene3D Phosphorylase Kinase; domain 1 8 99 - -
Mtr3g1813 465 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 455 - -
Mtr3g1813 465 SMART serkin_6 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1813 465 CDD CIPK_C 318 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1813 Mtr-Chr3 30606142 30609035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1813 6 444 CBL-interacting serine-threonine protein kinases AT5G58380 63.415 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr3g1813 Pkinase 4.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1813 - - gmx:100790905 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1813 3 30606142 30609035 Mtr3g1813 3 30606142 30609035 ECH
Mtr5g2532 5 33183939 33187490 Mtr3g1813 3 30606142 30609035 ECH
Mtr7g1773 7 33731448 33734590 Mtr3g1813 3 30606142 30609035 ECH
Mtr4g0818 4 10571503 10575059 Mtr3g1813 3 30606142 30609035 ECH
Mtr3g1813 3 30606142 30609035 Mtr5g2532 5 33183939 33187490 PCT