Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1806 ATGGCACATTCTCCTAATTCTTATATTGCATTGGTTTTGGTCTTCCTTCTTATAGGGACCTCTTCAGCTCAACTTTCTGAGAACTTTTATTCTAAGAAATGTCCTAAAGTTTTTAAAACAGTGCAGTCTGTTGTTAAAACAGCGGTTGCCAAAGAAAATCGCATCGGAGCATCTCTCCTTCGCCTCCACTTCCACGACTGCTTTGTTGATGGTTGTGATGGGTCAATACTACTTGATGACACTTCATCCTTCAAAGGAGAAAAAACTGCAGGTCCTAACAACAATTCTGTGAGAGGTTATGAAGTAATTGATGCTATAAAATCTAAGGTGGAAGCAATATGCCCCGGTGTTGTCTCATGTGCTGATATAGTGGCCATTACTGCTCGTGATTCTGTTGTGATTCTTGGAGGTCCATTTTGGAAGGTAAAAGTTGGGAGAAGAGATTCAAAGACAGCTAATTTCACTGCTGCAAACACTGGGGTGATTCCAGCTCCTACATCTAACCTAACTACCCTTATCTCAACTTTTAAAGCTCAAGGACTTTCTGTCAAGGACATGGTTGCTTTATCTGGAGCTCACACAATAGGGAGAGCAAGGTGTACAAGTTTCAGAGGCCACATATACAACGATAGCAACATTGACAGTACATTTGCAAAGATAAGGCAAAAGAACTGCCCTAGAACAACTGGCTCAGGAGACAACAATCTAGCAAATCTAGACTTGAGAACTCCAACTCATTTTGACAACAATTACTACAAGAATCTCATTATCAAAAGAGGACTACTTCATTCTGATCAAGTACTCTTCAATGGTGGAACCACTGATTCACTTGTTAAAACTTATAGCCAGAATGGAAAGGTTTTTGATTCTGATTTTGTAGCTGCAATGATTAAGATGGGAGATAATAAGCCTTTAACTGGGAAACAAGGGGAGATTAGGAAGAATTGTAGGAGGTTGAATTAG 963 0.3977 MAHSPNSYIALVLVFLLIGTSSAQLSENFYSKKCPKVFKTVQSVVKTAVAKENRIGASLLRLHFHDCFVDGCDGSILLDDTSSFKGEKTAGPNNNSVRGYEVIDAIKSKVEAICPGVVSCADIVAITARDSVVILGGPFWKVKVGRRDSKTANFTAANTGVIPAPTSNLTTLISTFKAQGLSVKDMVALSGAHTIGRARCTSFRGHIYNDSNIDSTFAKIRQKNCPRTTGSGDNNLANLDLRTPTHFDNNYYKNLIIKRGLLHSDQVLFNGGTTDSLVKTYSQNGKVFDSDFVAAMIKMGDNKPLTGKQGEIRKNCRRLN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1806 320 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Mtr3g1806 320 PANTHER PEROXIDASE 8 318 - -
Mtr3g1806 320 PANTHER PEROXIDASE 72-RELATED 8 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 Pfam Peroxidase 41 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Mtr3g1806 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Mtr3g1806 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g1806 320 Gene3D - 28 317 - -
Mtr3g1806 320 Gene3D Peroxidase, domain 2 163 299 - -
Mtr3g1806 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1806 Mtr-Chr3 30522247 30526510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1806 7 320 Peroxidase AT5G58400 64.968 1.81e-153 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1806 K00430 - gmx:100813384 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1806 3 30522247 30526510 Mtr3g1806 3 30522247 30526510 ECH
Mtr5g2529 5 33147769 33151977 Mtr3g1806 3 30522247 30526510 ECH
Mtr7g1767 7 33676539 33678914 Mtr3g1806 3 30522247 30526510 ECH
Mtr4g0828 4 10652616 10654641 Mtr3g1806 3 30522247 30526510 ECH
Mtr3g1806 3 30522247 30526510 Mtr5g2529 5 33147769 33151977 PCT