Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1797 ATGGCTTATCAGACATTTCCCCTAATGCTTGAAATGAAAGATGTTGTGCTTATAAAACCATCAAAATCAATTCCTTCTTGTATTCTTTCTCTTTCCACAATTGACAATAGAGAAATCTATAATAACCTTGCTCAAACTGTTCATATATATCGATCACCATCAATTAATGATTCTGATTTGAGTTTCAACTTTTGTCATGTATTTAAAGAAGCACTCTCAAAGGCTTTGTTTTATTATTATCCTCTTGCAGGTAGAATGGTGAAACATGCTGATGATGGAAAACTTAGAGTCAATTGCAATCCTAATGCAGAAAATTATGGTGTTCCATTCTTGGAAGCAATTGCTAACTGCACCCTTTCTTCTATTAATTACTTGGACAATACCGACACAGAAATTGCAAAACATTTGGTGCTTGATCCCGAAGAGAAAGCTTACCCTTTGGTGTTCAAGGTGACAAAATTTCTTTGTGGAGGTTTCACGATCGGAATGGGGGTGTTGCACGCTATCTGTGACGGAGTTGGTGCATCTCAATTCTTCAAAGCGATCATTGAACTTGCAAGGGGAAGAAATGAGCCCTCGAAGATACCTGTGTGGGAAAGAGAGAGACTTATTGGATCAATAACTGAACAACCATTTCCAGAAAGCCCTATGAACAAGGAATCTGTTGCATTTTCACCTTTTCTGAATCAACACAACACTACAGTTATGAAGCAATATTGTTTTAATATTGATGGTGAAATGATAACAAGGCTTAAGTTGAGCTTGATGAAGGAAAGTGGAAATATAAGGTTCACAACTTTTGAATCAATTGCAGGTTATGTTTGGAGATCAAGAGCAAGAGCCTTAAAACTTAACAGCAATGGTGAAACAGTACTGACCATTGTAGCAGGTATTAGACGCAACTTGAAGGATTTTGATCCTTTACCTAATGGTTATTATGGGAATTCATGTGTTGATGCAAACACTGTGTTAAAAGTTAGTGAGCTCGATGAAAGGCCACTCTATGAAATTATTAAGCTCATCAGAGAGACTAAAAACATTGCTTCCACCACTGATTTTGTCAAAAATTCAATCAACACGTTGGAGACTAATTATAACGAGGAATCAAGGATGGTAAGTACTGGTGCAGTAACGGTTCTGACAGAGTGGAAACATTTAGGTTTTCTTGATGGAAATGTAGATTTTGGTGGGAACGAAGCAGTGAATTTAGTACCAGCACCATGCAACATGTTTGCGTCAATTGAAATTAGCATTTTTACATCTCCTAATAAATTTGACAATGATGATCCATCAATGAAAGGAGGGGTTAAGATTTTTACTACACTCCCTGTTGCTGCCATGCCCAAGTTCAAGGAGGAAATTGAAGCTTTAAGATTTCTTAGTTAA 1386 0.3687 MAYQTFPLMLEMKDVVLIKPSKSIPSCILSLSTIDNREIYNNLAQTVHIYRSPSINDSDLSFNFCHVFKEALSKALFYYYPLAGRMVKHADDGKLRVNCNPNAENYGVPFLEAIANCTLSSINYLDNTDTEIAKHLVLDPEEKAYPLVFKVTKFLCGGFTIGMGVLHAICDGVGASQFFKAIIELARGRNEPSKIPVWERERLIGSITEQPFPESPMNKESVAFSPFLNQHNTTVMKQYCFNIDGEMITRLKLSLMKESGNIRFTTFESIAGYVWRSRARALKLNSNGETVLTIVAGIRRNLKDFDPLPNGYYGNSCVDANTVLKVSELDERPLYEIIKLIRETKNIASTTDFVKNSINTLETNYNEESRMVSTGAVTVLTEWKHLGFLDGNVDFGGNEAVNLVPAPCNMFASIEISIFTSPNKFDNDDPSMKGGVKIFTTLPVAAMPKFKEEIEALRFLS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1797 461 Gene3D - 8 211 IPR023213 -
Mtr3g1797 461 Pfam Transferase family 9 456 - -
Mtr3g1797 461 Gene3D - 228 454 IPR023213 -
Mtr3g1797 461 PANTHER ACYL TRANSFERASE 4 6 458 - -
Mtr3g1797 461 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1797 Mtr-Chr3 30409332 30411930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1797 8 406 Monolignol Biosynthesis Gene Families AT5G48930 26.024 3.47e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1797 K20240 - gmx:100801843 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1797 3 30409332 30411930 Mtr3g1797 3 30409332 30411930 ECH