Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1796 ATGGCGGATCAGAAAGCACCCCTAAAGCTAGAAATGAAAGATGTTGTGCTTGTAAAATCATCCAAGTCCATTCCTTCTTGTATTCTTTCTCTGTCTACACTTGACAATATATACATCAATAATAGCCTTTTTCTATTTGTTCATGTATACCGGTCATCAACAATTCATGATTCTGATTCGGGTTTCGACCCTTGTCATGTATTCAAAGAAGCGCTCTCAAAGGCTTTGGATTATTATTATCCTCTTGCAGGTAGACTAGTGAAACATGCTGGTGACGGAAGACTTAGAGTCGAGTTTGGTGTTGGTGATGCAGAATATGGTGTTCCATTCTTAGAAGCATATGCTAATTGCACCCTTTCTTCTCTTCATTACTTGGACAATACTGACACAGAAATTGCAAAAGACTTGGTGCTTGATATTCCTTCTCCTAAGGATAAAAGTTACCCTTTGGTGTTAATGGTGACAAAATTTCTTTGTGGCGGTTTCACAATTGGAATGGGGTTGTCGCATGCTATTTGTGACGGATTTGGCGCATCACAAATCTTCAGAGCAATTGTTGAACTTGCAAGAGGAAGAACTGAGCCATCAGTGAAACCTGTGTGGGAAAGAGAAAAACAAGTTGGATCAATAGCTATACAAACTTTTCCACAATGTCCCATGGACCGAGAATCTGTTTCACTTTCACCCTTTGTAAATCAAAATAATACTACGATAATTAAACAATATTGTTTTAAAGTAGAGGGTGAAATGATAAGAAGACTTAAGTTGAGTTTGATGAATGAAAATGAAAATATAAGGTTCACAACTTTTGAAGTGCTTGCAGGTTATGTGTGGAGGTCAAGAGCAAGAGCCTTAAAACTTAAAAGCAATGGTTTAACAGCGCTAACCATTGCAGTTGGTAGTAGACGCAACTTAAAGGATTATGATACTTTACCTAAAGGGTATTATGGGAATTCTATTATAGATGTAAATGTTGTTTTAAAAGTGAGTGTGCTCAACGAAATGCCACTCTATGAAACCATTAAGCTGATTAAAGAGACTAAAAATATTGCTTTCACTGCTGATTATGTTACAAACTCAATAAACTCTTTGGAATTGGAAGCTAGTGGTGCAGTAACGTCTCTAAGTGAGTTGAAACATTTGGGTTTTCAGGAAAATTTAAATTTTGAAGGCTATGAATTAGTGAATTTTTTAACTGCACCATGCAAGATGCTTGGCACCCTCGATACGTGTATTTTCTCATCTCCTAATAAACTTGATGATCATGATCTGTCAATGGAAGGAGGAGTTAGGATATTTACATCACTCCCTGAAGCTGTAGGAGATCCACACTCAAGGTGCATGCATGAATCACATGCATATATATACACATTGCGATGA 1380 0.371 MADQKAPLKLEMKDVVLVKSSKSIPSCILSLSTLDNIYINNSLFLFVHVYRSSTIHDSDSGFDPCHVFKEALSKALDYYYPLAGRLVKHAGDGRLRVEFGVGDAEYGVPFLEAYANCTLSSLHYLDNTDTEIAKDLVLDIPSPKDKSYPLVLMVTKFLCGGFTIGMGLSHAICDGFGASQIFRAIVELARGRTEPSVKPVWEREKQVGSIAIQTFPQCPMDRESVSLSPFVNQNNTTIIKQYCFKVEGEMIRRLKLSLMNENENIRFTTFEVLAGYVWRSRARALKLKSNGLTALTIAVGSRRNLKDYDTLPKGYYGNSIIDVNVVLKVSVLNEMPLYETIKLIKETKNIAFTADYVTNSINSLELEASGAVTSLSELKHLGFQENLNFEGYELVNFLTAPCKMLGTLDTCIFSSPNKLDDHDLSMEGGVRIFTSLPEAVGDPHSRCMHESHAYIYTLR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1796 459 Gene3D - 231 442 IPR023213 -
Mtr3g1796 459 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 449 - -
Mtr3g1796 459 PANTHER ACYL TRANSFERASE 4 5 449 - -
Mtr3g1796 459 Pfam Transferase family 9 367 - -
Mtr3g1796 459 Gene3D - 5 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1796 Mtr-Chr3 30396758 30398675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1796 8 367 Monolignol Biosynthesis Gene Families AT5G48930 27.671 3.90e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1796 K20240 - gmx:100801843 378.252