Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1794 ATGGAATATGAGAAAGCTCCCCTAAATATTGAAAAGGAAGATGTTTTGCTTGTAAAGCCATCAAAATCCACTTCTTCTTGTATTCTTTCTCTATCAACACTTGACAATAAAGGTGCCAATAATAACATTGCCCAAACTGTTCATGTATACCGATCATCATCAATTCATGATTATGATTCCAGTTTCAACCCTTGTCATGTATTCAAAGAAGCGTTGTCCAAGGCTTTGTTTTACTATTATCCTCTAGCAGGTAGACTAGTGAGACATACTGATGGAAAATTTAGAGTCAAGATCAATACCGACAGTGTAGAATTTGGCGTTCCGTTCTTGGAAGCAACTGCTAACTGCACACTTTCTTCTCTTCATTACCTGGACAATACTAACACAGAAATTGCAAAACATTTGGTGCTTGATCTTCCTTCTCCTCAAGATAAAAATTACCCTTTGGTGTTAATGGTGACGAAATTTCTTTGTGGTGGTTTCACAATTGGAATGGGGATGTCACATGCTATTTGTGACGGATTTGGCGCATCACAATTCTTCAAAGCAATTCTTGAACTTGCAAGAGGAAGAACCGAGCCATCAGTGAAACCTGTGTGGGAAAGAGAAAACCAAGTTGGAACAATAACTACACAACCATTTCCACAATGCCCCATGGACAGAGAATCTGTTGCATTTTCACCCTTTGTGAATCAACCTAATACTAAAATTATTAAGCAATATTGTTTTAAAGTAGAGGGCGAAACGATAACAAGACTTAAGTTGAGTTTGATGAACGAAAATATAAGGTTCACAACTTTTGAAGTGCTTGCAGGTTATGTGTGGAGGTCAAGAGCAAGAGCCTTAAAACTTAGCAGCAATGACAAAACAATGCTAAATGTGTTAGTTGGTATCAGACGAAACTTGATGGATTATGAAACTTTACCTAAAGGGTATTATGGCAATTCTACCATAGATGCAAAAGTTGTTTTAAAAGTGAGTGAACTCGATGAAATGCCACTCTATAAAATCGTTAAGCTGATTAAAGAGACTAAAAATATTGCTTTCACTGCTGATTATGTAAGAAACTCAATAAACTCTTTGGAGACAAATCAAGAGGATGGTTTAAGCATGGAATTGGAAGCTAGTGGTGCAGTAACGGTTCTAACAGAGTGGAAACATTTGGGTTTTCAGGAAAATTTAGATTTTGGAGGTTATGAATTAGTGAATTTTCTACCTGCACCATGCAAGATGCTTGCCACCGTCGATGCATGCATTTTCTCATCAGCTAATAAACTTGATGATCATGATCCATCAATGGATGGAGGAGTTAGGATATTTACTTCACTCCCCGTTGCTGCTATGCCTAAGTTCAAGGACGAAATTGAAGCTTTAAGGTTTCTTTATAGAAATTAA 1395 0.3706 MEYEKAPLNIEKEDVLLVKPSKSTSSCILSLSTLDNKGANNNIAQTVHVYRSSSIHDYDSSFNPCHVFKEALSKALFYYYPLAGRLVRHTDGKFRVKINTDSVEFGVPFLEATANCTLSSLHYLDNTNTEIAKHLVLDLPSPQDKNYPLVLMVTKFLCGGFTIGMGMSHAICDGFGASQFFKAILELARGRTEPSVKPVWERENQVGTITTQPFPQCPMDRESVAFSPFVNQPNTKIIKQYCFKVEGETITRLKLSLMNENIRFTTFEVLAGYVWRSRARALKLSSNDKTMLNVLVGIRRNLMDYETLPKGYYGNSTIDAKVVLKVSELDEMPLYKIVKLIKETKNIAFTADYVRNSINSLETNQEDGLSMELEASGAVTVLTEWKHLGFQENLDFGGYELVNFLPAPCKMLATVDACIFSSANKLDDHDPSMDGGVRIFTSLPVAAMPKFKDEIEALRFLYRN* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1794 464 Pfam Transferase family 10 457 - -
Mtr3g1794 464 Gene3D - 6 216 IPR023213 -
Mtr3g1794 464 Gene3D - 230 455 IPR023213 -
Mtr3g1794 464 PANTHER ACYL TRANSFERASE 4 4 459 - -
Mtr3g1794 464 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1794 Mtr-Chr3 30378851 30381869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1794 8 366 Monolignol Biosynthesis Gene Families AT5G48930 26.954 1.06e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1794 K20240 - gmx:100783730 429.869