Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1793 ATGGCGTATCAGAAAGAACCCCTAAACCTAGAAATGAAAGATGTTGTGCTTGTAAAACCATCCAAGTCCATTCCTTCTTGTATTCTTTCTCTGTCTACACTTGACAATAAAGACAACAATTATAACCTTTGTCAAGCTGTTCATGTATACCGGCCATCAACAATTCATGATTCTGATTCGGGTTTCGACCCTTGTCATGTATTCAAAGAAGCACTCTCAAAGGCTTTGGATTATTATTATCCTCTTGCAGGTAGAATAGTGAGACATGCCGGAGACGGAAGACTTAGAGTCGAGTTTGGTGTTGGTGGTGCAGAATATGGTGTTCCATTCTTAGAAGCAACTGCTAATTGCACCCTTTCTTCTCTTCATTACTTGGACAATACTGACACAGATATTGCAAAAGACTTGGTGCTTGATGTTCCTTCTCCTCAAGATAAAAATTACCCTTTGGTATTCATGGTGACAAAATTTATTTGTGGTGGTTTCACAATTGGAATGGGGTGTTCACATGTTGTTTGTGATGGATATGGTTCAATTCAAGTCTTCAAAGCAATTATTGAACTTGTAAAAGGAAGAAGTGAGCCTTCTGTGATACCTGTGTGGGAAAGAGAGAGACTAGTTGGGGCTTCAACAAGTACCAAACAACCACTTCCACCATTACTTCAACCAAAAGAACCTATTGCATTTTCACCTTTAGTTCAACCAAAAACAGTTATTAAAATCTATTGTTTTAAGGTTGAGAATGAGGTGATAAAAAGACTTAAGATGAGTTTGATGAAGGAAGGTGGTAGTGAAAGTGAACCAGTTACAACTTATGAGTCACTTGGTGCTTATGTGTGGAGGTCAAGAGCAAGAGCCTTACAACTTAGCAACAATGGAAAAACAATGTTGAATATGTTAGTTGGTATTAGACGCAGCATGAAAGGTTATGATCCTTTGCCTATAGGGTATTATGGTAATACTACTGTGGATGGAAAAGTTGTGTTAAAAGTTAGTGAGCTCAATGAAATGCCACTCTATGAAATTGTTAAGTTGATCAAAGAGGCTAAAAAGATTGCTTCCTCCACTGATTATGTCAAAAACTCGATCGATCACACTCCGGAGACGGAGCATAAGCAAGATTTTAGCATGGACGGTAGCGGTGCGGTAACGATTCTGACTGAGTGGAAGCATTTAGGTTTTGTTGATGAAAATAATATAGATTTTGGAGGGTATGAATCAGTGAATTTTGTACCAGCACCATGCAACATGTTTGCGTCTTTGGAAGGGTGCATTTTCGCATCTCCTGGTAAACTTGATGATGATGATCCATCAATGAAAGGAGGAGTTAAGATTTTTACATCACTCCCTGTTGCTGCCATGCCAAGGTTCAAGGAGGAAATTGAAGCTTTAAGATTACTTAATTGA 1407 0.3859 MAYQKEPLNLEMKDVVLVKPSKSIPSCILSLSTLDNKDNNYNLCQAVHVYRPSTIHDSDSGFDPCHVFKEALSKALDYYYPLAGRIVRHAGDGRLRVEFGVGGAEYGVPFLEATANCTLSSLHYLDNTDTDIAKDLVLDVPSPQDKNYPLVFMVTKFICGGFTIGMGCSHVVCDGYGSIQVFKAIIELVKGRSEPSVIPVWERERLVGASTSTKQPLPPLLQPKEPIAFSPLVQPKTVIKIYCFKVENEVIKRLKMSLMKEGGSESEPVTTYESLGAYVWRSRARALQLSNNGKTMLNMLVGIRRSMKGYDPLPIGYYGNTTVDGKVVLKVSELNEMPLYEIVKLIKEAKKIASSTDYVKNSIDHTPETEHKQDFSMDGSGAVTILTEWKHLGFVDENNIDFGGYESVNFVPAPCNMFASLEGCIFASPGKLDDDDPSMKGGVKIFTSLPVAAMPRFKEEIEALRLLN* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1793 468 PANTHER ACYL TRANSFERASE 4 5 465 - -
Mtr3g1793 468 Gene3D - 235 461 IPR023213 -
Mtr3g1793 468 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 465 - -
Mtr3g1793 468 Pfam Transferase family 10 463 - -
Mtr3g1793 468 Gene3D - 6 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1793 Mtr-Chr3 30362124 30364037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1793 8 416 Monolignol Biosynthesis Gene Families AT5G48930 27.231 8.52e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1793 K20240 - gmx:100801843 425.246