LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g1791	ATGGGGACTGAAACTGAGTCATCAGATAGCTCTCTCATTCTCATCAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGACTTCTTTTGTGGGAAGAAGGTCTGTTGTCAAGGAGAGATTCTCAAAGAAGTACAGACATCCGACTTTGGATGCTAAGTTGACACTCAAGCGCTTAAATGCGGAGGCGAGGTGCACAACAAAAGCAAGGCGACTCGGTGTTTGTACTCCTGTGCTGTATGCTGTGGATCCTGTATCACACACTTTAACATTTGAATTTGTTGAAGGACCTTCAGTCAAAGATGTATTTCTCGAATTCGGATCATGTGGTGTCAATGAAGAGCGCTTGGGAAAGATTGCATCCCAAATTGGTGATGTAATTGCGAAGTTACATGATGGTGGTCTTGTTCATGGCGATTTAACAACATCAAACATGTTACTAAAGAATGATACTGATCAGTTGGTTCTTATTGACTTTGGTTTAAGCTTCACTTCAACTCTACCAGAAGATAAAGCCGTCGATTTGTATGTTTTAGAAAGAGCCCTTGTTTCGATGCATTCTTCATGTGGTAATGTGATGGATCAGATACTTGCTGCTTACCGCAAATCATCGAAACAGTGGTCATCCACAATGAACAAGCTTGCAGACGTGCGACAGAGAGGACGAAAGAGGACCATGGTTGGATGA	681	0.4258	MGTETESSDSSLILIKQGAEARVFETSFVGRRSVVKERFSKKYRHPTLDAKLTLKRLNAEARCTTKARRLGVCTPVLYAVDPVSHTLTFEFVEGPSVKDVFLEFGSCGVNEERLGKIASQIGDVIAKLHDGGLVHGDLTTSNMLLKNDTDQLVLIDFGLSFTSTLPEDKAVDLYVLERALVSMHSSCGNVMDQILAAYRKSSKQWSSTMNKLADVRQRGRKRTMVG*	227

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr3g1791	226	CDD	PKc	17	160	-	-
	Mtr3g1791	226	Gene3D	Transferase(Phosphotransferase) domain 1	108	223	-	-
	Mtr3g1791	226	PANTHER	O-SIALOGLYCOPROTEIN ENDOPEPTIDASE	2	226	IPR022495	GO:0004674
	Mtr3g1791	226	PANTHER	EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1	2	226	-	-
	Mtr3g1791	226	TIGRFAM	arch_bud32: Kae1-associated kinase Bud32	14	220	IPR022495	GO:0004674
	Mtr3g1791	226	SUPERFAMILY	Protein kinase-like (PK-like)	14	174	IPR011009	-
	Mtr3g1791	226	Pfam	Protein kinase domain	47	162	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g1791	226	Gene3D	Phosphorylase Kinase; domain 1	20	92	-	-
	Mtr3g1791	226	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	133	145	IPR008266	GO:0004672\|GO:0006468
	Mtr3g1791	226	ProSiteProfiles	Protein kinase domain profile.	9	226	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g1791	226	SMART	serkin_6	9	225	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr3g1791	87	176	EF-hand Containing Proteins	AT3G50530	38.043	2.73e-06	45.8

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Mtr3g1791		Pkinase	4.6e-11	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g1791	K08851		-	gmx:100782376	387.882