Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1786 ATGACCTCCTCTTTCTTCTCTGACCTCCTTAATTCTCCAACCGACCAAAACCTTAAAGACACCGAAAGATCTCAAAATCACGTGTTGTCGGATCAAAACAGGTTGGGTTTACCCCCCAAATTCAAGTCTACACCTCCTCCATCTCTTCCTCTTTCTCCTACACCTCTCTTTTCTCCTTCTTCTTATTTTTCTATACCTCCTGGTTTCTCTCTTTCTGAACTTCTTGATTCTCCTGTTCTCCTTAACTCTTCTCATATTCTTCCATCTCCAACTACTGGATCATTTGCTAATAATCAAGGCTTCAATTGGAAGAATAATTATGAGGAAAAGCAAGAGAATGTCAAGGCAGAAGAGGAAACCATCTCATCAAGTTTCTCCTTCCAAGCTCAACCAGCTGGGTTTCAATCTTCAAACGCCATAGTTCAAAATGGATGGAGTATGGTGAAAGCAGAAAACTCTTCTTCAATGCAAAGTTTCACACCAGAGAGTAATTCTACTAGTGAACAAAATAACTACAACAAGAGTGGTTCACAATCAAATTACAACAATTATCAATCACAACCACAAGTTCAGATCCTTAGTAGAAGATCAGATGATGGATACAATTGGAGAAAATATGGACAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTATAAATGCACTTACCCTAATTGTCCAACAAAGAAAAAAGTTGAGAGGGGTTTAGATGGACAAATTACTGAGATAGTTTACAAAGGTAGTCATAATCATCCTAAGCCTGTGGCTAACAAGAGGAACACAAACTCGATGTCTTCATCGTCGTTGTCACATGCAAATCCTCCTCCTTCAAATCATTTTGGAAATGAAATTCAAATGGATTTGGTTGCTACACCGGAGAATTCATCGATATCGATTGGAGATGATGAATTCGAGCAGACTTCTCATAAATCTGGTGGAGATCATGATCAGTATTGTGAAGATGAACCTGATGCAAAAAAATGGAGAATAGAAGGTGAAAATGAGGGGATATCATTAGGAGTTGGAAATAGAACAGTGAGGGAACCTAGAGTTGTTGTTCAAACAACAAGTGACATTGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTAAAGGGAAATCCAAATCCAAGGAGTTACTACAAGTGCACAAACCCAGGATGTCCAGTGAGAAAACATGTCGAAAGAGCCTCACAAGACCTAAGAGCAGTGATAACAACGTATGAAGGAAAACACACTCATGATGTTCCTGCACCACGTGGAAGTGGAAACCACTCTATCAACAAACCACTACCAATTCAAACAACTATGAACAACACCAACAATTCCATCAACAACACTTCAGTTAATAATGGATTCTTCAACCATGAGATGATGCAGAACAATGGATTCACGGTGGATTCTTACATGAATATGAATCAACAACGTGTTAATAATATTATTAGAGGTAGAGCCAAAGAGGAGCCTGTAGAAGATGACTCGTTTTTTGAATCTTTCCTATCTTGA 1527 0.3838 MTSSFFSDLLNSPTDQNLKDTERSQNHVLSDQNRLGLPPKFKSTPPPSLPLSPTPLFSPSSYFSIPPGFSLSELLDSPVLLNSSHILPSPTTGSFANNQGFNWKNNYEEKQENVKAEEETISSSFSFQAQPAGFQSSNAIVQNGWSMVKAENSSSMQSFTPESNSTSEQNNYNKSGSQSNYNNYQSQPQVQILSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERGLDGQITEIVYKGSHNHPKPVANKRNTNSMSSSSLSHANPPPSNHFGNEIQMDLVATPENSSISIGDDEFEQTSHKSGGDHDQYCEDEPDAKKWRIEGENEGISLGVGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASQDLRAVITTYEGKHTHDVPAPRGSGNHSINKPLPIQTTMNNTNNSINNTSVNNGFFNHEMMQNNGFTVDSYMNMNQQRVNNIIRGRAKEEPVEDDSFFESFLS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1786 508 MobiDBLite consensus disorder prediction 1 52 - -
Mtr3g1786 508 MobiDBLite consensus disorder prediction 152 188 - -
Mtr3g1786 508 MobiDBLite consensus disorder prediction 297 322 - -
Mtr3g1786 508 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 34 463 - -
Mtr3g1786 508 SUPERFAMILY WRKY DNA-binding domain 195 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g1786 508 Pfam WRKY DNA -binding domain 198 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g1786 508 Pfam WRKY DNA -binding domain 365 422 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g1786 508 MobiDBLite consensus disorder prediction 1 19 - -
Mtr3g1786 508 MobiDBLite consensus disorder prediction 305 322 - -
Mtr3g1786 508 MobiDBLite consensus disorder prediction 248 284 - -
Mtr3g1786 508 Gene3D WRKY domain 183 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g1786 508 SMART WRKY_cls 364 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g1786 508 SMART WRKY_cls 197 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g1786 508 ProSiteProfiles WRKY domain profile. 359 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g1786 508 Gene3D WRKY domain 351 417 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g1786 508 MobiDBLite consensus disorder prediction 256 282 - -
Mtr3g1786 508 ProSiteProfiles WRKY domain profile. 198 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g1786 508 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 34 463 IPR044810 GO:0003700
Mtr3g1786 508 SUPERFAMILY WRKY DNA-binding domain 356 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1786 Mtr-Chr3 30268448 30272975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1786 1 507 WRKY Transcription Factor Family AT2G38470 43.964 6.36e-112 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr3g1786 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1786 K13424 - gmx:100127421 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1786 3 30268448 30272975 Mtr3g1786 3 30268448 30272975 ECH
Mtr3g1786 3 30268448 30272975 Mtr5g2509 5 32907086 32910928 PCT