Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1783 ATGGAGTCAAGGCAAGACATTAGCAATAGCAACAATTCTATGCCTGATGATGGAACTGAGTCACAGTTTGGAGGATCTTTCATATGTCATACAATTAATCATATCAACTCTAGGGGGTATTGGTTAGGAGAAAATCCACTTGCTTATTCTGTCCCTCTTTTCTTGATCCAAGTTTTTCTCATGTTCATTTTCACACAGCTTAGTTACGTTATTCTCAGGCCATTTGGACAATCTTGTTTTGTTTCTCAGATTCTTGGAGGTGTGACACTAGGTCCTTCAATTCTTGGTCACTATTCAGCATTTGCGAACACTTTCTTCCCAATAAAAGGAAGAACTGTGCTTGACACATTAGCATTTTTTGGATTCATGTTATTCATCTTCCTACTTGGGGTAAAGATAGATCCAACCATCATTTTCCGATCAGCGAAAAGGACGTTTGCCATTGGAATTTTAGGCTTCTTTGTTCCTTACATATTTGGCGGATCGGTTGTTTATATCATCGACCGCTTTGTATCATTGGATAATGATGTTTCGAAGGTGCTTCCTATAGTGGTAGAAATTCAATCTATCACAGCCTTTCCAGTAATTTCGTGCTTTCTTGCTGAACTTCAAATCCTCAATTCAGAGATCGGACGGTTGGCTTCGTCATCTTCGCTAGTATGCGATGTTTGCTTTAGTTTAGTTTTGATAATGAAGTTTGCTGCAAATATATCAACAACGAAGTCAATAGGAGTATCTATTGGATTGATCTGTTCAACCACTCTTCTTGTTTTGTTCATAGTTTTTGTTGTTCATCCAGCTGCATTATATGCTATTCATCACACACCAGAAGGAAAACCTGTTCAAGAAATTTACATTTGTGGAACTCTTATAATACTAATATTCTGTGGATTCATCGGTGAAGTTATCGGCGTAGATGCAATTTTTGTATCATTTATGGTAGGGTTGGCTATACCAGATGGTCCTCCATTAGGTGCAGCATTGGTAGATAAACTAGAGTGTTTTGTTTCAGTTGTGCTTTTACCGATACTTTTCGTGGTCGTTGGATTGAGGACGGATGTTTTTGCAATACAGAAGATGAAGAATTTGGGAATTATTCAGTTGATTATTTGCGTTGCTTTTTTCGGTAAAATTGTTGGGGTTTTATTGCCTCTACTTTTTTGTAGGATGCCATTTAGAGATGCTCTTTCTCTTGGTCTTATAATGAACTGCAAAGGCACAGTTGAATTGGCATTGTTGATCAACCTGAGATTAAAAAATGTTCTGGATGATGAATTGTTTGCAATTATGGTTCTTACTTTAGTGCTTGTAACCGGCATTGTGTCGCCTATTGTGAAAGCTCTATATGATCCTTCTAGAAGGTTTCTTGCTTATAAAAGGAGGACAATATTGCATCACCAAAGCGAAGAAGAATTGCGCATACTAGCTTGCATTCACAAACCAGATAATGTATTGGCTGTTCTGAACCTCCTTGCAGCTTCGAATGCAACTGAAAAAACCCGCATAGATTTAGTTGTACTGCAGCTAGTTAAGCTTGTTGGAAGAGCAGCCTCCGTGCTTGTTGCCCACATACCGCGAGAAAAGCCTAGCGAAAGAATCTTCAATGCATTCAGCAAATTTGAAGACGCTTATAAGGGAAAGGTATCATTGCATTGCTATAAAGGTATCTCACCCTATGCTACAATGCACAATGATGTTTGCTACTTGGCACTTGAAAAAAGAATAACTTTCATAATCATACCTTTCCATAAACAATGGATAATCGGAGGTATGGCCGAGTCAACTTTCGCATTCAAGCAACTCAACAAAAACGTTCTCGAGAAAGCTCCTTGCTCGGTCGGTGTCCTAATCGATCGTGGCAATCAGAAGAAATTTTGGTGCGGCTATTTGAACGAATCAACATATCTAGTCGCAGTGCTTTTCTTTGGAGGCCCAGACGATAGAGAAACGCTCGCGTACGCAAAACGTATGATGGATCAACCTAATGTAAATATTACTCTCTTTCATTTTTCATCGTCTTCGAAAGATTTTATTGGTGGTTCAGATAGAAGCAAAAAGCTTGATACTCAAATATTGAGTGAGTTTAGGTTGAGTGCTTTTAGGAATGATAGGGTTTCTTATAAAGAAAATGTTGTAACAAATGGAAGAGATGTGCTTTCAGTTATTGAATACATGGATAGTTTTTATGATCTTGTTATGGTTGGAAAGAGGCATGAAGATTCAAAGTTGATGTCTGAACTTGGAAAATGGAAGCATGGTGAGTTGGGAACTGTAGGAGAGATTCTTGCTTCTTTGAATATTGGAGATAAAACTTCAGTTTTAGTTGTGCAACAACAAATTAAATTTTGGGGGTCACGTGATCAAGAGGAGTCTACACATTTGAGAAGAGTAAATGTATAG 2400 0.3808 MESRQDISNSNNSMPDDGTESQFGGSFICHTINHINSRGYWLGENPLAYSVPLFLIQVFLMFIFTQLSYVILRPFGQSCFVSQILGGVTLGPSILGHYSAFANTFFPIKGRTVLDTLAFFGFMLFIFLLGVKIDPTIIFRSAKRTFAIGILGFFVPYIFGGSVVYIIDRFVSLDNDVSKVLPIVVEIQSITAFPVISCFLAELQILNSEIGRLASSSSLVCDVCFSLVLIMKFAANISTTKSIGVSIGLICSTTLLVLFIVFVVHPAALYAIHHTPEGKPVQEIYICGTLIILIFCGFIGEVIGVDAIFVSFMVGLAIPDGPPLGAALVDKLECFVSVVLLPILFVVVGLRTDVFAIQKMKNLGIIQLIICVAFFGKIVGVLLPLLFCRMPFRDALSLGLIMNCKGTVELALLINLRLKNVLDDELFAIMVLTLVLVTGIVSPIVKALYDPSRRFLAYKRRTILHHQSEEELRILACIHKPDNVLAVLNLLAASNATEKTRIDLVVLQLVKLVGRAASVLVAHIPREKPSERIFNAFSKFEDAYKGKVSLHCYKGISPYATMHNDVCYLALEKRITFIIIPFHKQWIIGGMAESTFAFKQLNKNVLEKAPCSVGVLIDRGNQKKFWCGYLNESTYLVAVLFFGGPDDRETLAYAKRMMDQPNVNITLFHFSSSSKDFIGGSDRSKKLDTQILSEFRLSAFRNDRVSYKENVVTNGRDVLSVIEYMDSFYDLVMVGKRHEDSKLMSELGKWKHGELGTVGEILASLNIGDKTSVLVVQQQIKFWGSRDQEESTHLRRVNV* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1783 799 Pfam Sodium/hydrogen exchanger family 60 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr3g1783 799 MobiDBLite consensus disorder prediction 1 20 - -
Mtr3g1783 799 Gene3D - 53 455 IPR038770 -
Mtr3g1783 799 PANTHER OS08G0117800 PROTEIN 21 784 - -
Mtr3g1783 799 PANTHER CATION/H + ANTIPORTER 21 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1783 Mtr-Chr3 30239899 30243559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1783 20 788 Antiporter Super Family AT2G13620 39.125 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1783 - - gmx:102665255 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1783 3 30239899 30243559 Mtr3g1783 3 30239899 30243559 ECH
Mtr3g1783 3 30239899 30243559 Mtr5g2507 5 32887030 32890412 PCT