Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1782 ATGGATGCCAAAAATGAAAGAATAGATCAATGGACTTCCCATGGAATAATTGATAATGAGAAATTAGTTTGTCAATACATGACAACAGATACACACAAGGGTGTGTTTTATGGAGAAAATCCCCTCAAAGAAACCAAATCTATTCTAGCATTTCAGATTATTGTTATGTTTGCTCTTAGTAGAATTACTCATTTCTTGTTAAGTCCTTGTCATCAAACTCTCATTGTTGCACAAATTGTGGCTGGTATCATAGTGGGTCCATTATTTTTGGGTCGAGACAACACAAGTTTTGAGATGTTATTTCCAACAGCAAGCATAATGATACTTTCAACATTTGCAGAATTTGGAATGATAATTTATTTCTTTAAGATGGGGGTGCAAATAAACTCTAAACAGATTTTTATGGTTGAGAAGCGTGCAGTAATAATTGGAATATCAGGCCACTTATCTTCTATGGTACTTGGCATTATAGCACTAAGACTTGTTGAAAGATTCACCCCTTTAGGATCTGAAAAACTTAGTATGGTAAATTTGGCAATTTTTGGTTCATTAACCTCATTTTCAGTTATTAGTAGTTTCCTAAGTGAGATGAACATTTTAAATTCAGAGATTGGGAGAATGGCATTATCAACATCCATAGTTAGTGATGCATGTATGTGGGTAGTTTATTTTATAGTAATCAATGGAACTTTAGCCTTGGAACGTAAATCATATAAATTTCTTCTAGAAATGTCTATGACAATTGGTTATTTCGCCGTCTTATATTTTTTGTTAAGGCCATTAGTTATATGGATCTCGAACCGCAATCCAAAGGGAAAGTCGATGACGGAAAGCCATTTCTTGATGATAATTGGTATACTTTTGATAGTTGGACTCTCCGCACAAATTGCGGGACAATCTTCTTTTATCATTGCGTTTTGGTTTGGTTTGTTTTTGCCGGATGGTCCTCCTTTAGGTTCTATTTTGAGTGAAAGACTTGGTACTATTGGTTCTACTTTGACTGTTCCAGCTTATTGTACTATTAGTGGGTTGAGGACAAAAGTTCCTAATTTAGTAGGGCCAAAAATAGCATTCATGGAGGTTATCATAATTGCTGGGTATATAGGAAAATTTGTTGGAACCATTATACCATCACTTTACTTTCATATTGAATTTTGGGATTCCTTTGCTTTGGCTACAATCATGTGTTGCAAAGGCCTCATTGATCTCAGTTTGTACAACATATTATTGAACAGTAAGCAAATAGGTGAACTTCCATTCACTCTCATGGTATATACAATGGTGGCCATAACAGGATTGACAACTATAGCTGTTCATTACATATATGATCCATCAAGGAGGTACAAAACCTACATGAGAAAAACAGTTAAAGACTCTCAAAAAGATTTTGATCTCAAAATACTTGTATGCATCCAAGATGAAGCAAATGTACATCCAATGATAAACCTCCTTCAAGTTACAAATCCAACAAACACAACACCTCTCTCAGTCTTTGTTTTGCATCTCATGGAATTATCTGGTAGAGCAGCCTCAATCCTTACCAAAAATGAGAGTACTAAATTTAAATCAAGATCTTTTAAGGAGAATTCAAGTCAACACATAAGCAATGTGTTTAATCAATTTCTATTGCATAACCAAGGATGTGTCACATTACAACTTTTTACAGCAATTGCACCATATGCTAGCATGCATGACGATATATGCTACATGGCAATGGACACAAAATCGAACATTTTAATCGTGCCATTTCATAAGCAATGGTCGATGAATGGAAACATTGAAGCTTCTAATGGTTCGGTTAGGTTAGTGAACCAAAAATTACTAAACAAAGCGCCTTGTTCGACCGGTGTCTTAATCGATCGAAGCCAAATGAGCGGAAAATTATTGGTTATTCATGAAAAGTGCTTTTGTGAAATTGCTATGCTATTTTTAGGTGGTGCAGATGATCAAGAAGCGATGGCTTACGCTATGCGTATCGCGGAACATCCTAATGTAAAACTCACCGTGATTTGGGTACGGTACATGATGCAACAAAAACAATTTAACATAAAAAATCCTTACATTGATTTGATGGAACATGTAAGGTATACTAGTAACCTTAAAGAAAAGGTGTTTTTTAAGGAGGAGATTGTGGAAGATGGGGCAGGAACAACACAAGTTATTCGTAGGATGGAAGGAAGGTTTAGTTTGGTTATAGTTGGTAGACATCATATAGCAAATTCTCCATGTATTATGGGCTTGACAGAATGGTGTGAACTTCCTGAGCTTGGTCCAGTTGGGAACCTATTAGCCACATCAGATTTTACATTTTCTGTTTTAGTTGTGCAACAACAACCCTATAATAATGAATTTTGGTATTGTAGGTGA 2367 0.3545 MDAKNERIDQWTSHGIIDNEKLVCQYMTTDTHKGVFYGENPLKETKSILAFQIIVMFALSRITHFLLSPCHQTLIVAQIVAGIIVGPLFLGRDNTSFEMLFPTASIMILSTFAEFGMIIYFFKMGVQINSKQIFMVEKRAVIIGISGHLSSMVLGIIALRLVERFTPLGSEKLSMVNLAIFGSLTSFSVISSFLSEMNILNSEIGRMALSTSIVSDACMWVVYFIVINGTLALERKSYKFLLEMSMTIGYFAVLYFLLRPLVIWISNRNPKGKSMTESHFLMIIGILLIVGLSAQIAGQSSFIIAFWFGLFLPDGPPLGSILSERLGTIGSTLTVPAYCTISGLRTKVPNLVGPKIAFMEVIIIAGYIGKFVGTIIPSLYFHIEFWDSFALATIMCCKGLIDLSLYNILLNSKQIGELPFTLMVYTMVAITGLTTIAVHYIYDPSRRYKTYMRKTVKDSQKDFDLKILVCIQDEANVHPMINLLQVTNPTNTTPLSVFVLHLMELSGRAASILTKNESTKFKSRSFKENSSQHISNVFNQFLLHNQGCVTLQLFTAIAPYASMHDDICYMAMDTKSNILIVPFHKQWSMNGNIEASNGSVRLVNQKLLNKAPCSTGVLIDRSQMSGKLLVIHEKCFCEIAMLFLGGADDQEAMAYAMRIAEHPNVKLTVIWVRYMMQQKQFNIKNPYIDLMEHVRYTSNLKEKVFFKEEIVEDGAGTTQVIRRMEGRFSLVIVGRHHIANSPCIMGLTEWCELPELGPVGNLLATSDFTFSVLVVQQQPYNNEFWYCR* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1782 788 Pfam Sodium/hydrogen exchanger family 54 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr3g1782 788 PANTHER CATION/H(+) ANTIPORTER 14 35 779 - -
Mtr3g1782 788 Gene3D - 47 450 IPR038770 -
Mtr3g1782 788 PANTHER CATION/H + ANTIPORTER 35 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1782 Mtr-Chr3 30235447 30238521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1782 14 778 Antiporter Super Family AT1G06970 35.733 3.50e-170 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1782 - - gmx:100787550 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1782 3 30235447 30238521 Mtr3g1782 3 30235447 30238521 ECH