Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1780 ATGTCTGAAAACGGTGAAGAGAAATTACTCGCTGTGGCACGCCACATAGCAAAAACTCTAGGCCAAACAAATCACAACATGACCGATGATATTCTTCAAATCTTCTCAAATTTCGACGGTAGATTCTCTAAAGAAAATCTCTCCGATTCAGCTCCACGGAATGATACCATACGCTACACCGCACTTGAACAAACTCTTAACAATCTCGACCGTCAGATTTCTCATCATCTCTCCTCGGAGATTCCCACGGTTGCTTCCGCGGCGTTTCTCTCCTCCGTTGACGAGCTTGTTGCGATTATCGAAGATTGGAGTCCTCTCTCCGATGATAAAACCGTCGGCGCGTGTCTTCTACGTGCTGAGGATATTCTTCAACAAGCTATGTTTCGTGCGGAGGAAGAGTTTCGGTCGTTGATGGAACTCGGTGGCGCGTCGTTCAACGGAGAGATGAATCTGAACTGTAATTCACTTTATGAAACAAACGATGAGGTGGATGAAGATGAAGAAGAGGAGATTGATGGTGATGAGGATTTGATTCCGGTGGCGAAAGCGGTTGTTGATTATAACGTGGTGATCGACGCGCTTCCTCCGGCTACGGTGAACGATTTACGTGAAATCGCGAAAAGGATGATAGCAGCGGGGTTTGGGAAGGAGTGTTCGCATGTTTACGGTGGTTGTAGGAGGGAGTTTTTGGAAGAGAGTTTATCGAGATTAGGGTTACAGAAATTGAGTATTTCGGAAGTTCATAAGATGCAATGGCAAGATCTTGAAGATGAAATTGAACGATGGATTAAGGCTTCGAATGTTGCTCTGAAGATTCTGTTTCCGAGTGAACGGCGTCTATGTGATCGTGTTTTCTCCGGTTTATCTTCGTCATCTGCGGCTGCCGATCTTTCATTTATGGAGGTCTGTCGTGGTTCGGCGATTCAGTTACTGAATTTCTCTGATGCGGTGGCGATTGGTAGTAGATCACCTGAACGGTTGTTTAGAGTGCTTGATGTGTTTGAGACAATGCGTGACCTAATTCCTGAATTTGAATCATTGTTTTCTGATCAGTATTGTTCGTTTCTTGTTAACGAAGCAATCACGAATTGGAAGAGGTTGGGTGAAGCGATAAGAGGAACTTTTATGGAATTGGAGAATTTGATTAGTCGTGATCCGGTGAAGGCAGTGGTTCCCGGCGGAGGTCTTCATCCGATTACTCGCTACGTGATGAACTATCTTCGTGCTGCATGTAGGTCGAGTAAAACCCTAGAACTAGTTTTCAAAGACAATGCACTTTCTTTGAAGGATTACCATAAGCATGATGAAAGTTTACAATCAAATTCATCATTTTCGGTTCAAATTTCATGGATTATGGATTTGTTGGAACGGAATTTGGAAGCGAAATCTAGAATTTACAAAGACCCTGCTTTGTGTTCTGTTTTTATGATGAACAATGGGAGATACATTGTTCAGAAGACCAAAGACAGTGAATTAGGAACACTTATGGGTGATGATTGGATCAGAAAACACAGTACAAAAGTGCGGCAATGCCATACAAACTATCAAAGAAGCTCATGGAACAAGTTGTTGGGGTTTCTGAAGGTGGAGACATTGGCTGCAAAACCTATGAAGGAGAAGCTAAAGATGTTCAATCTGCATTTTGAAGAGATTTGTAGGGTTCAATCTCAATGGTTTGTTTTCGATGAGCAGCTCAAGGAAGAAATAAGGATCTCCATCGAAAAGCTCTTGTTGCCTGCTTATGGAAGCTTTATTGGAAGGTTTCAAATTTTACCGGAGCTTGCTAAGAATAGTGACAAGTATATCAAGTTTGGAATGGAGGACATTGAAGCTCGGCTTAACAACTTGTTTCAGGGAAGTGGTGGATCGAATGGTAGCCGTAAGTGA 1887 0.4287 MSENGEEKLLAVARHIAKTLGQTNHNMTDDILQIFSNFDGRFSKENLSDSAPRNDTIRYTALEQTLNNLDRQISHHLSSEIPTVASAAFLSSVDELVAIIEDWSPLSDDKTVGACLLRAEDILQQAMFRAEEEFRSLMELGGASFNGEMNLNCNSLYETNDEVDEDEEEEIDGDEDLIPVAKAVVDYNVVIDALPPATVNDLREIAKRMIAAGFGKECSHVYGGCRREFLEESLSRLGLQKLSISEVHKMQWQDLEDEIERWIKASNVALKILFPSERRLCDRVFSGLSSSSAAADLSFMEVCRGSAIQLLNFSDAVAIGSRSPERLFRVLDVFETMRDLIPEFESLFSDQYCSFLVNEAITNWKRLGEAIRGTFMELENLISRDPVKAVVPGGGLHPITRYVMNYLRAACRSSKTLELVFKDNALSLKDYHKHDESLQSNSSFSVQISWIMDLLERNLEAKSRIYKDPALCSVFMMNNGRYIVQKTKDSELGTLMGDDWIRKHSTKVRQCHTNYQRSSWNKLLGFLKVETLAAKPMKEKLKMFNLHFEEICRVQSQWFVFDEQLKEEIRISIEKLLLPAYGSFIGRFQILPELAKNSDKYIKFGMEDIEARLNNLFQGSGGSNGSRK* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1780 628 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 618 - -
Mtr3g1780 628 Pfam Exo70 exocyst complex subunit 260 614 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr3g1780 628 SUPERFAMILY Cullin repeat-like 73 617 IPR016159 -
Mtr3g1780 628 Gene3D Exocyst complex component Exo70 68 627 - -
Mtr3g1780 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 618 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1780 Mtr-Chr3 30212170 30214541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1780 1 620 EXO70 exocyst subunit family AT5G58430 66.614 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1780 K07195 - gmx:100803694 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1780 3 30212170 30214541 Mtr3g1780 3 30212170 30214541 ECH