Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1769 ATGTCCCCTTCACCATCACCAATCTTCTTAACTTTTCTCATCTTTCTCTTCCATTTTCAACACACCTCATCCTTCACCCTCTCAGTAGAAAACCCTGAACAAAACATCATACTCTCCCCCAAAAAAACCTTCACAGCAGGTTTCTACCCTGTAGGACAAAATGCTTATTCCTTTGCCATATGGTTCACCCAAAAACACAAAAATCTCAACAACACTACCATTGTTTGGATGGCAAATCGTGACCAACCAGTTAATGGAAAACGCTCAACACTTTCCCTTCTCAAAACTGGAAACCTCGTCTTAACAGATGCAGCTCAGTCCATTGTTTGGTCCACTGAAACCACCTCAACAAAACCACTTGAACTACTATTACATGAAACAGGTAACCTTGTTCTTCAAGAACAAAGCAGAAATGGTTCAAGAAAAAACAATATTCTATGGCAAAGTTTTGACTTCCCAACAGATACACTTTTACCTGACCAAACCCTAACGAGGTTCACGAACCTCGTTTCATCAAGAAGTCAGACGAACTATTCGTCTGGCTTCTACAAACTATTTTTTGACAATGATAACATTCTTCGTCTTTTATATCAAGGACCGAGAGTATCTAGCATTTATTGGCCAGATCCTTGGACTACAAGCAATGGTGCAGCTGGTAGTGGTACAAGAAGTACTTACAATAGTAGTAGAATCGCGTCGTTGGATTCGTTTGGTAGTTTTAGTTCTTCTGATGATTTTGTTTTTAATACTGCTGATTATGGAACTTTTTTGCAACGTAGACTTACACTTGATCATGATGGTAACGTTCGCATTTATAGTAGAAAAGATGAGGAACAGGGTTGGTTTGTTTCGGGTCAATTTCGTCAACAACCTTGTTTTATTCATGGAATTTGTGGGCCTAATAGTACTTGTAGTAATGATCCATTGACTGGTAGAAAGTGTTCTTGTCTACCTGGTTATGTTTGGATTAATGATCAAGATAGTTCTCAAGGTTGTAGACCCAATTTTGAACTTTCTTGCAGTAACAAGACTCATGATGAGTTAAGTTTTTTGGCTTTGTCTCATGTTGATTTTTATGGATATGATTACGGATTTTATACGAATAAAACTTACAAAGAATGTGAGACTTTGTGTGCACAATTGTGTGATTGTGCAGGATTTCAGTATACTTTTACAGCTGAATATGGTGGTGTCTATTGGTGTTATCCGAAAATTCAGTTACTTAATGGCCATCGTTCGCAGAGTTTTCTTGGATCATTCTACTTGAAATTGCCGAAAAGTAGTGGTTTTGTTGATGAGATTAGGATTCAACAAAATAGCAGTGGAATGGTTTGTGAGAGGAATGGAGTGGTAAAGCTTGACAGAGAATACATGAAGAAGAAAGAAAATGGTTCATTGAAGTTCATGCTTTGGTTTGCTTGTGGATTAGGAGGATTAGAGCTTTTGGGATTTTTTATGGTTTGGTTTTTCTTGTTTAGGAGCAGCAGAAATTCTGATGAGAATCATGAGTATGTTCTAGCAGCAACAGGGTTTAGGAAATTCAGTTACTCTGAATTGAAACAAGCTACAAAAGGTTTTAGTCAAGAGATCGGAAGAGGTGCTGGAGGAACTGTGTATAAGGGTGTTTTATCTGACAATCGAGTTGCTGCGATAAAGCGTTTGCATGAAGCGAATGAAGGAGAGAGTGAGAGTGAGTTTCTTGCCGAAGTTAGCATCATTGGAAGGCTTAACCACATGAATTTGATTGGTATGTGGGGTTATTGTGCTGAGGGAAAGCATAGATTGTTGGTTTATGAGTACATGGAAAAGGGTACTTTAGCTGATAATCTCTCATCAAATGAACTTGATTGGGGTAAGAGGTATAACATTGCTATGGGAACTGCAAAGGGACTTGCGTATTTACACGAAGAATGTTTGGAGTGGATTTTGCATTGCGATATAAAACCGCAAAACATACTTGTTGACTCCGATTACCAACCGAAGGTAGCTGATTTTGGTCTGTCCAAGCTATTGAATAGGGATGACCTTGATAATTCAAATTTCTCGAGGATTCGAGGGACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACATGCAAATCACTTCTAAAGTGGACGTTTATAGCTATGGAGTCGTTGTGTTGGAGATGATTACCGGAAAGAGTCCAACAACAGGTATCCAAATCAAAGACAAAGAAGAGTTGTGTCATGAGAGGTTGGTAACATGGGTTAGGGAAAAAAGAAGAAAAGGAGTAGAAGTTGGTTGTTGGGTGGCACAAATTGTAGACCCAAAATTGGGATCAAATTATGATGTAAAGAAGATGGAGACATTGGCAAATGTTGCTTTGGATTGTGTACAAGAAGATAAAGATGTTAGACCTACCATGAGTCAAGTTGTTGAGAGGCTATTAAGGGATGACCATGATTATTGA 2433 0.3859 MSPSPSPIFLTFLIFLFHFQHTSSFTLSVENPEQNIILSPKKTFTAGFYPVGQNAYSFAIWFTQKHKNLNNTTIVWMANRDQPVNGKRSTLSLLKTGNLVLTDAAQSIVWSTETTSTKPLELLLHETGNLVLQEQSRNGSRKNNILWQSFDFPTDTLLPDQTLTRFTNLVSSRSQTNYSSGFYKLFFDNDNILRLLYQGPRVSSIYWPDPWTTSNGAAGSGTRSTYNSSRIASLDSFGSFSSSDDFVFNTADYGTFLQRRLTLDHDGNVRIYSRKDEEQGWFVSGQFRQQPCFIHGICGPNSTCSNDPLTGRKCSCLPGYVWINDQDSSQGCRPNFELSCSNKTHDELSFLALSHVDFYGYDYGFYTNKTYKECETLCAQLCDCAGFQYTFTAEYGGVYWCYPKIQLLNGHRSQSFLGSFYLKLPKSSGFVDEIRIQQNSSGMVCERNGVVKLDREYMKKKENGSLKFMLWFACGLGGLELLGFFMVWFFLFRSSRNSDENHEYVLAATGFRKFSYSELKQATKGFSQEIGRGAGGTVYKGVLSDNRVAAIKRLHEANEGESESEFLAEVSIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMEKGTLADNLSSNELDWGKRYNIAMGTAKGLAYLHEECLEWILHCDIKPQNILVDSDYQPKVADFGLSKLLNRDDLDNSNFSRIRGTRGYMAPEWVFNMQITSKVDVYSYGVVVLEMITGKSPTTGIQIKDKEELCHERLVTWVREKRRKGVEVGCWVAQIVDPKLGSNYDVKKMETLANVALDCVQEDKDVRPTMSQVVERLLRDDHDY* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1769 810 CDD STKc_IRAK 530 805 - -
Mtr3g1769 810 SMART serkin_6 524 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1769 810 Pfam S-locus glycoprotein domain 252 321 IPR000858 GO:0048544
Mtr3g1769 810 PIRSF SRK 3 809 IPR024171 GO:0004674
Mtr3g1769 810 Gene3D - 152 281 IPR036426 -
Mtr3g1769 810 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 809 - -
Mtr3g1769 810 SMART blect_4 28 153 IPR001480 -
Mtr3g1769 810 Pfam D-mannose binding lectin 73 165 IPR001480 -
Mtr3g1769 810 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Mtr3g1769 810 ProSiteProfiles Bulb-type lectin domain profile. 22 145 IPR001480 -
Mtr3g1769 810 CDD PAN_AP_plant 336 425 - -
Mtr3g1769 810 SUPERFAMILY Protein kinase-like (PK-like) 502 804 IPR011009 -
Mtr3g1769 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 210 IPR036426 -
Mtr3g1769 810 Gene3D Transferase(Phosphotransferase) domain 1 601 809 - -
Mtr3g1769 810 Gene3D - 23 151 IPR036426 -
Mtr3g1769 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 809 - -
Mtr3g1769 810 Gene3D Phosphorylase Kinase; domain 1 490 600 - -
Mtr3g1769 810 Pfam Protein kinase domain 527 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1769 810 CDD B_lectin 37 153 IPR001480 -
Mtr3g1769 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Mtr3g1769 810 ProSiteProfiles Protein kinase domain profile. 524 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1769 Mtr-Chr3 30048249 30051023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1769 514 803 Trihelix Transcription Factor Family AT5G38560 43.051 9.49e-68 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr3g1769 Pkinase 5.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1769 - - gmx:100806357 1082.4