Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1768 ATGATTCTAATGATTCATTCACCAATCTTCTTTACAATTTTCATTTTGCTCTTCCATTTTCAACATTCATTATCATTTTCCCTCTCAGTGGAGAGACATGAAAATGACATTATAGTCTCACCCAAAGGCACATTCACCGCGGGTTTTTATCCCGTAGGTGAAAATGCTTATTCATTCGCCATATGGTTCACTCAAAAACACAAAAACCTTTCCAATCCTACCGTTGTTTGGATGGCTAATCGTGACCAACCTGTTAACGGAAAACGCTCAACACTTTCCCTTCTCAAAACTGGCAACCTCATTTTAACCGACGCAGGACAGTTCAACGTTTGGTCCACAAACACTAACTCATCCAAAAAACTTGAGTTGTTTTTGTGCGACACAGGAAATCTCATTCTTCGAGAACACAACACTATTGTTTCCAATTTCTTGTGGCAGAGTTTTGATTCCCCAACAGATACTCTCCTTCCTGATCAAAGTTTCACAAGGTACATGCAACTCATTTCCTCAAAAAGCAAGAATGACTATTCATCTGGCTTCTACAAGCTTTTATTCAACTACGACAATCTTCTCTGTCTTATCTACGATGGACCTCAAGTTTCAAGAGTTTACTGGCCAGTTCCATGGCTCCTCAGTTGGCAATCTGGTAGATCCACCTACAACAGTAGCAAGGTTGCAATACTAAGTCCTTTAGGGGAATTCAGCTCTTCTGATAACTTCACTATAACAACTAGTGACTATGGGACACTACTCCAACGAAGGTTGTCCCTTGATCATGATGGTAACGTTCGTGTTTATAGCCGAAAACATGGACAAGAGAAGTGGTCGGTATCAGCGCAATTTCGTATAGGTTCTTGTAATATTCAGGGGATTTGTGGACCCAATGGCGTTTGCAGTTATAATTTCCGTAGTGGTAGAAAGTGTTCGTGCCTTCCAGGTTATATCAGGATCGATAATCAAGACTGGTTCCAAGGGTGCAAACCAAGCTTCCAACTTTCATGTGACAACAAGACAAGTTCAAATACTCGCTTCCAACACTTACCCCATGTCAAATTTTATGGATATGATTATGGTACTTACGCAAATTATACCTATAAACAATGTAAGCATTTGTGCATGCGACTGTGTGAGTGTATCGGATTTGAATACACATATCGGAAGCAAAGTGGTACTTATAGTTGTCACCCAAAGACAAAGTTTTTAAATGGGTTTCATTCACCACATTTCCAAAAATCAATTTTCTTGCTATTGCCGAAAAACAATATTGATTTTTCCCACGAGAACATTGTCAAGGATGATAGCTTGGTTTGTTCACAAAATGCACCAAAACAACTAGTAAGATTATATGTCAAAGGCAAAGACAATCGATCAGTGAAGTTCATGCTTTGGTTTGCAAGTGGCTTGGGAGGAATTGAGTTCTTCTGCTTCTTTATGGTATGGTGTTTCTTATTAAAGAACAGGAAGCATTCTAGTGAAGGAAATCACAACTATGTTCTTGCAGCAGCAGCAACAGGATTTACGAAATTCACCTACTCTGAACTAAAACATGCAACAAAGAATTTCAGTCAAGAGATTGGAAAGGGTGCTTGTGGAACTGTGTATAAGGGTGTTTTATCTGATAATCGAGTTGCTGCGATAAAGCGTTTGCATGAAGCGAATCAAGGAGAGAGTGAGAGTGAGTTTCTTGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTAATTGGTATGTGGGGCTATTGTGCTGAGGGAAAACATAGATTGTTGGTTTACGAGTGCATGGAAAACGGTACTTTAGCCGATAATCTTTCATCAAATAAACTTGATTGGAGTAAAAGGTATAACATTGCTATGGGAACTGCAAAGGGCCTTGCTTATTTACACGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCGCAAAACATACTTGTTGACTCTGATTACCAACCGAAGGTAGCGGATTTTGGTTTGTCCAAGCTATTAAATAGGGACGACTTTGATCATTCAAAATTCTCGAGGATTCGAGGGACAAGAGGTTACATGGCACCTGAGTGGGTTTTCAACATGGAAATCACTTCAAAAGTGGATGTTTATAGCTATGGAGTCGTTGTGTTGGAGATGATTACCGGAAAGAGTCCAACAACAGGTATCCAAATCAAAGACAAAGAAGAGTTGTGTCATGAGAGGTTGGTAACATGGGTTAGGGAGAAAAGAAGAAAAGGATTAGAAGTTGGTTGTTGGGTTGAGCAAATTGTTGACCCTAAATTGGGATCAAATTATGATGTAAAGAAGATGGAGACTTTGGCAGATGTTGCTTTGGATTGTGTAAAGGAAGAGAAAGATGTTAGACCCACCATGAGTCAAGTTGTTGAGAGGCTATTAAGGGATGAGCATAATTAA 2415 0.3942 MILMIHSPIFFTIFILLFHFQHSLSFSLSVERHENDIIVSPKGTFTAGFYPVGENAYSFAIWFTQKHKNLSNPTVVWMANRDQPVNGKRSTLSLLKTGNLILTDAGQFNVWSTNTNSSKKLELFLCDTGNLILREHNTIVSNFLWQSFDSPTDTLLPDQSFTRYMQLISSKSKNDYSSGFYKLLFNYDNLLCLIYDGPQVSRVYWPVPWLLSWQSGRSTYNSSKVAILSPLGEFSSSDNFTITTSDYGTLLQRRLSLDHDGNVRVYSRKHGQEKWSVSAQFRIGSCNIQGICGPNGVCSYNFRSGRKCSCLPGYIRIDNQDWFQGCKPSFQLSCDNKTSSNTRFQHLPHVKFYGYDYGTYANYTYKQCKHLCMRLCECIGFEYTYRKQSGTYSCHPKTKFLNGFHSPHFQKSIFLLLPKNNIDFSHENIVKDDSLVCSQNAPKQLVRLYVKGKDNRSVKFMLWFASGLGGIEFFCFFMVWCFLLKNRKHSSEGNHNYVLAAAATGFTKFTYSELKHATKNFSQEIGKGACGTVYKGVLSDNRVAAIKRLHEANQGESESEFLAEVSIIGRLNHMNLIGMWGYCAEGKHRLLVYECMENGTLADNLSSNKLDWSKRYNIAMGTAKGLAYLHEECLEWILHCDIKPQNILVDSDYQPKVADFGLSKLLNRDDFDHSKFSRIRGTRGYMAPEWVFNMEITSKVDVYSYGVVVLEMITGKSPTTGIQIKDKEELCHERLVTWVREKRRKGLEVGCWVEQIVDPKLGSNYDVKKMETLADVALDCVKEEKDVRPTMSQVVERLLRDEHN* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1768 804 CDD B_lectin 38 151 IPR001480 -
Mtr3g1768 804 Pfam S-locus glycoprotein domain 236 314 IPR000858 GO:0048544
Mtr3g1768 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 206 IPR036426 -
Mtr3g1768 804 Gene3D Transferase(Phosphotransferase) domain 1 596 804 - -
Mtr3g1768 804 SUPERFAMILY Protein kinase-like (PK-like) 502 798 IPR011009 -
Mtr3g1768 804 SMART serkin_6 519 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1768 804 ProSiteProfiles PAN/Apple domain profile. 334 413 IPR003609 -
Mtr3g1768 804 ProSiteProfiles Protein kinase domain profile. 519 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1768 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Mtr3g1768 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 804 - -
Mtr3g1768 804 CDD STKc_IRAK 525 800 - -
Mtr3g1768 804 SMART blect_4 29 151 IPR001480 -
Mtr3g1768 804 PIRSF SRK 1 804 IPR024171 GO:0004674
Mtr3g1768 804 Gene3D Phosphorylase Kinase; domain 1 483 594 - -
Mtr3g1768 804 ProSiteProfiles Bulb-type lectin domain profile. 23 146 IPR001480 -
Mtr3g1768 804 Pfam D-mannose binding lectin 74 163 IPR001480 -
Mtr3g1768 804 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 6 804 - -
Mtr3g1768 804 Pfam Protein kinase domain 522 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1768 804 Gene3D - 27 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1768 Mtr-Chr3 30041426 30043991 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1768 485 798 Trihelix Transcription Factor Family AT5G38560 40.123 4.42e-67 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr3g1768 Pkinase 5.5e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1768 - - gmx:100806357 1073.92