Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1766 ATGGCAAATCGTGATCAACCAGTTAATGGAAAACGCTCAACACTTTCCCTTCTTAATACCGGCAATCTAGTATTAACCGATGCTGGGTTGTCCAACGTTTGGTCGACTAAAACTAGCTCATCCAAAGCACTTCAGTTGTTTTTGTACGAAACAGGAAACCTCGTTCTGAGAGAACAAGACATAAATGGTTTCGTTTTGTGGCAAAGTTTTGATTTCCCAACAGATACTCTCCTTCCTGATCAAAAATTGATTGAGTTCATGAACCTTGTTTCGTTGAAAAGTGTCAACAACTATTCCTCTGGTTCCTACAAGCTTTTTTTCGATTCTAACAATAATCTCTATCTTCGCTATGATGGCGCGCAAAGTTCAAGCGTTTATTGGGATGCAGATAGGTCGTTCTCATACAATAATAGCAGGGTAGCAACATTAAATCGCTTGGGAAACTTCAATTTTTTCGATGATTTCACTTTCAAAACAACTGATTATGGAACAGTCCTACAAAGAAGATTGACCCTTGATATTGATGGTAATGTTCGAGTTTATAGCCGAAAACATGGGCAAGTGAATTGGTCAGTAACAGGGCAATTCCTCCAGCAACCTTGTCAAATACACGGGATTTGTGGACCTAATAGTGCTTGCGGTTATGATCCAAGAACTGGTAGAAAATGTTCATGTCTTCCAGGTTATAGCATAATCAACAACCAAGACTGGTCTCAAGGATGCAAACCAAGCTTCGAATTTTCTTGCAACAAGACAAAGTCTCGTTTCAAAGTCTTACCCCATGTTGAGTTTGACAACTATGAATCCTATAAAAATTACACCTATAGTCAGTGTAAGCATTTGTGTTTACGATCATGTGAATGCATAGCCTTCCAATTTTGCTATATGAGGGAAGAGGGTTTCTCTTATTGTTACCCAAAGACGCAGTTATTAAACGGACGCCATTCAACAACGTTCGAAGGTTCACTCTTTCTGCGATTGCCAAAAAACAATACTGTTTTTTCGGAAGAATATGATAGCTTGGTTTGCTTAGGAAATAAAGGAGTAAAACAACTAGGAATATCATACATCAATTCCAAAGAAAATGGATCAGTGAAGTTCATGCTTTGGTTTGTGAGTTGCTTGGGCGGAATTGAGGTCTTATGCTTCTTTCTAGTAGGGTGTATGTTATATAAGAAGAATAGGAAGCAATCTATTGTTGTTATTCATGGGAATGATCTAGAGGAAGTTACAGGGTTTAGGAAATTCAGTTACTCTGAAATAAATCAAGCTACAAAAGGTTTTAGCGAAGAGATCGGAAGGGGAGCTGGAGGAACTGTATATAAAGGTGTTTTATCTGATAATCGAGTTGCTGCGATAAAGCGATTGCATGATGCAAGTCAAGGAGGGAATGAGTTTCTTGTTGAAGTTAGCATCATTGGAAGGCTTAATCACATGAATTTGATAGGAATGTGGGGTTATTGTGCCGAGGGAAAACACAGATTGTTGGTTTCTGAGTACATGGAAAATGGTACTTTAGCTGATAATCTCTCATCAAGTGAACTTGATTGGGGTAAAAGGTATAACATTGCTATGGGAACTGCAAAGGGTCTTGCTTATTTACACGAAGAGTGTTTGGAGTGGATTTTGCATTGCGATATAAAGCCACAAAACATACTTGTTGACTCGGATTATCAACCTAAGGTAGCAGATTTTGGTTTGTCTAAGCTATTGAATAGGAATGACCTTGATAATTCAAATTTCTCGAGGATTCGAGGGACAAGAGGTTACATGGCACCTGAATGGGTTTTCAACATGCAAATTACTTCAAAAGTGGATGTTTATAGCTATGGAGTTGTGGTGTTGGAGATAATTACTGGTAAGGGTCCAACAACAAGTATACCAAACAAAGATGGAGAAGACTTTTGTGATGAGAGCTTAGTAACATGGGTTAGGGAAAAAAGGAGAAAAGGATCTAAATTTGGTTGTTGGGTTGAGGAAATTGCTGACCCTAAATTGGGATCAAATTATGATGCAAAGAGAATGGAAACTTTGGCAAATGTTGCTTTGGATTGTGTGGCTGAAGAGAAAGATGTTAGACCCACCATGAGTCAAGTTGTTGAGAGGCTCCTAAGTCATTAA 2121 0.3852 MANRDQPVNGKRSTLSLLNTGNLVLTDAGLSNVWSTKTSSSKALQLFLYETGNLVLREQDINGFVLWQSFDFPTDTLLPDQKLIEFMNLVSLKSVNNYSSGSYKLFFDSNNNLYLRYDGAQSSSVYWDADRSFSYNNSRVATLNRLGNFNFFDDFTFKTTDYGTVLQRRLTLDIDGNVRVYSRKHGQVNWSVTGQFLQQPCQIHGICGPNSACGYDPRTGRKCSCLPGYSIINNQDWSQGCKPSFEFSCNKTKSRFKVLPHVEFDNYESYKNYTYSQCKHLCLRSCECIAFQFCYMREEGFSYCYPKTQLLNGRHSTTFEGSLFLRLPKNNTVFSEEYDSLVCLGNKGVKQLGISYINSKENGSVKFMLWFVSCLGGIEVLCFFLVGCMLYKKNRKQSIVVIHGNDLEEVTGFRKFSYSEINQATKGFSEEIGRGAGGTVYKGVLSDNRVAAIKRLHDASQGGNEFLVEVSIIGRLNHMNLIGMWGYCAEGKHRLLVSEYMENGTLADNLSSSELDWGKRYNIAMGTAKGLAYLHEECLEWILHCDIKPQNILVDSDYQPKVADFGLSKLLNRNDLDNSNFSRIRGTRGYMAPEWVFNMQITSKVDVYSYGVVVLEIITGKGPTTSIPNKDGEDFCDESLVTWVREKRRKGSKFGCWVEEIADPKLGSNYDAKRMETLANVALDCVAEEKDVRPTMSQVVERLLSH* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1766 706 SMART serkin_6 426 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1766 706 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 706 - -
Mtr3g1766 706 ProSiteProfiles PAN/Apple domain profile. 249 323 IPR003609 -
Mtr3g1766 706 CDD STKc_IRAK 432 703 - -
Mtr3g1766 706 Pfam D-mannose binding lectin 2 83 IPR001480 -
Mtr3g1766 706 CDD PAN_AP_plant 248 328 - -
Mtr3g1766 706 Pfam S-locus glycoprotein domain 155 230 IPR000858 GO:0048544
Mtr3g1766 706 PIRSF SRK 1 706 IPR024171 GO:0004674
Mtr3g1766 706 Gene3D Transferase(Phosphotransferase) domain 1 501 706 - -
Mtr3g1766 706 ProSiteProfiles Bulb-type lectin domain profile. 1 69 IPR001480 -
Mtr3g1766 706 Pfam PAN-like domain 249 308 IPR003609 -
Mtr3g1766 706 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 706 - -
Mtr3g1766 706 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 128 IPR036426 -
Mtr3g1766 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Mtr3g1766 706 Gene3D Phosphorylase Kinase; domain 1 389 500 - -
Mtr3g1766 706 Gene3D - 82 194 IPR036426 -
Mtr3g1766 706 ProSiteProfiles Protein kinase domain profile. 426 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1766 706 ProSitePatterns Protein kinases ATP-binding region signature. 432 454 IPR017441 GO:0005524
Mtr3g1766 706 Gene3D - 2 81 IPR036426 -
Mtr3g1766 706 Pfam Protein kinase domain 429 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1766 706 SUPERFAMILY Protein kinase-like (PK-like) 410 703 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1766 Mtr-Chr3 30031242 30033480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1766 416 703 Trihelix Transcription Factor Family AT5G38560 43.478 1.82e-68 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr3g1766 Pkinase 2.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1766 - - gmx:100806357 920.998