Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1765 ATGATGCATCAATGTTGCATTTATACCTGCCAGGTGCCGGTTTCTTCCAAACATCTTCCTCTTGTCTCAAAGGCCGAACCTGTGGAGTTATGGAAGCACTTTCTTAGAGATAATCAAGGCTACGTTCTTGCAGGAGCAAGATTTCGAAAATTCACTTATTCGGAACTAAAACTTGCAACAAAATGTTTTAGTCAAGAGATTGGAAGTGGTGCTGGAGGAACTGTGTATAAGGGTTTATTATCTGATAATAGAGTTGTGGCTATAAAGAGACTGCATGAAGCAAACAAAGGAGAGAGTGAATTTCTTGCTGAAGTTAGCGTCATTGGAAGGCTTAACCACATGAATTTGATTGGTATGTGGGGGTATTGTGCAGAGGGAAAACACAGATTGTTAGTTTTTGAGTACATGGAAAAAGGTTCTTTAGCGGATAATTTGTCATCAAATGCACTTAATTGGGGTAAGAGGTATAAAATTGCTCTCGGAACTGCAAAGTGTCTTGCATATTTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGACATAAAGCCGCAAAACATACTAATTGACTCTGATTACCAACCCAAGGTAGCGGATTTTGGGTTGTCTAAGTTACTACAAAGGAACAATCTTGATAATTCAAGTTTCTCAAGGATGAGAGGAACAAGAGGTTACATGGCACCTGAATGGATTTTCAACTTGCCAATCACTTCCAAGGTAGATGTTTATAGCTATGGAGTTGTGCTGCTAGAGATGATTACCGGGAAGAGTGCAATGACAAGTATCTTAATCACAGATGGAGAAAAGACTCATAATGAGAGTTTGGTAACATGGGTGAGAGAGAAAAGAAGGAAATTATTAGAAATGAAATCTTTGGTTGAACAAATAGTAGACCCTACATTGGGATCAAATTATGACATGGTTAAATCGGAGACTTTGACAATGGTTGCTCTAAAGTGTGTTGAGGAAGAGAAAGACATGAGACCTAACATGAGTGAAGTTGTTGAAATGCTTCAAACTCATGAACATGATTCTTGA 1038 0.3834 MMHQCCIYTCQVPVSSKHLPLVSKAEPVELWKHFLRDNQGYVLAGARFRKFTYSELKLATKCFSQEIGSGAGGTVYKGLLSDNRVVAIKRLHEANKGESEFLAEVSVIGRLNHMNLIGMWGYCAEGKHRLLVFEYMEKGSLADNLSSNALNWGKRYKIALGTAKCLAYLHEECLEWILHCDIKPQNILIDSDYQPKVADFGLSKLLQRNNLDNSSFSRMRGTRGYMAPEWIFNLPITSKVDVYSYGVVLLEMITGKSAMTSILITDGEKTHNESLVTWVREKRRKLLEMKSLVEQIVDPTLGSNYDMVKSETLTMVALKCVEEEKDMRPNMSEVVEMLQTHEHDS* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1765 345 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 32 345 - -
Mtr3g1765 345 Pfam Protein kinase domain 64 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1765 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Mtr3g1765 345 SMART serkin_6 61 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1765 345 ProSiteProfiles Protein kinase domain profile. 61 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1765 345 CDD STKc_IRAK 67 339 - -
Mtr3g1765 345 ProSitePatterns Protein kinases ATP-binding region signature. 67 89 IPR017441 GO:0005524
Mtr3g1765 345 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 32 345 - -
Mtr3g1765 345 SUPERFAMILY Protein kinase-like (PK-like) 45 340 IPR011009 -
Mtr3g1765 345 Gene3D Transferase(Phosphotransferase) domain 1 136 345 - -
Mtr3g1765 345 Gene3D Phosphorylase Kinase; domain 1 32 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1765 Mtr-Chr3 30029226 30030450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1765 51 342 Trihelix Transcription Factor Family AT5G38560 41.333 6.65e-68 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr3g1765 Pkinase 2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1765 - - mtr:MTR_3g031510 623.239