Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1759 ATGTGCCAATGTGTAGCCTTCCAATATCGCTTGGTGAGGGATCAGGGTATATCTTATTGCTATCCAAAGAGACAATTACAAAACGGCTTTAGTTCTCCGGAATTTCGAGGATCCATCTTTTTGCGATTGCCAAAAAGAAAACATGCTTTTTACAATGAGAATGATATACAAAATGGAAGCTTGGTTTGTTCGAGAAATACTGGAGTACAGCAACTAAAAAGATCATACATCAAAGGCAAAAAAAATGGATCACTTAATTTTTTGCTTTGGTTTGCGACTTGCTTGGGAGTAATTGAGGTATTGTGCTTCTTTATTGCGGGGTGCTTCTTATTTAAGAATAGGAAGCACTCCGCTACAAATAAACAAGGCTACATTCTTGCAATAGCCCCTGGATTTCGGGAATTCAGTTACTCTGAATTGAAACAAGCAACAAAAGGTTTCAGTCAAGAGATTGGAAAGGGTGCTGGAGGAACTGTATATAAAGGTTTATTATCTGATAATAGGGTTGTGGCTATAAAACGACTACACGAAGCAAACCAAGGTGAAAGAGAATTCCTTGCGGAAGTGAACATAATTGGAATGCTCAACCATATGAACTTAATTGGCATGTTGGGGTATTGTTTAGCCGGAAAACACAGATTGTTGGTTTTAGAGTTCGTAGAAAAGGGTTCTTTAGCTGAAAACCTCTCATCAAATGCACTTGATTGGGGTAAGAGGTATAACATTGCTCTAGGAACCGCAAAGGCTCTTGCATATTTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCTCAAAACATACTTATTGACTCTGATTACCGACCCAAAATAGTAGATTTTGGGTTGTCTAAGCTATTACATAGGAACAATCTTAATAATTCAAGTTTCTCAAGGATGAGAGGAACAAGAGGTTACATGGCACCTGAATGGATTTTCAACTTGCCAATCACTTCCAAGGTAGATGTTTATAGTTATGGAATTGTGGTGTTGGAGATGATTACCGGAAAGAGTCCAACGACCTGTATCGAAATCACAGATGATGGAATAGTGTCACATAATGAGAGGTTAGTAACATGGATTAAAGAGAAAAGAAGGAAAGAATCAGAAGTGGGATGTTGGATTGAACAAATAGTTGACCCTGCATTGGGATTAAATTATGACATTGTTCAATTGAAGACCTTGGCAGTGGTGGCTTTGGATTGTGTAGAGAAAGAGAAAGATGTTAGACCCACCATGAGTCAAGTTGTTGAGAGGCTCCAAAGTCATCAACATGATTCTTGA 1293 0.3821 MCQCVAFQYRLVRDQGISYCYPKRQLQNGFSSPEFRGSIFLRLPKRKHAFYNENDIQNGSLVCSRNTGVQQLKRSYIKGKKNGSLNFLLWFATCLGVIEVLCFFIAGCFLFKNRKHSATNKQGYILAIAPGFREFSYSELKQATKGFSQEIGKGAGGTVYKGLLSDNRVVAIKRLHEANQGEREFLAEVNIIGMLNHMNLIGMLGYCLAGKHRLLVLEFVEKGSLAENLSSNALDWGKRYNIALGTAKALAYLHEECLEWILHCDIKPQNILIDSDYRPKIVDFGLSKLLHRNNLNNSSFSRMRGTRGYMAPEWIFNLPITSKVDVYSYGIVVLEMITGKSPTTCIEITDDGIVSHNERLVTWIKEKRRKESEVGCWIEQIVDPALGLNYDIVQLKTLAVVALDCVEKEKDVRPTMSQVVERLQSHQHDS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1759 430 ProSiteProfiles Protein kinase domain profile. 145 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1759 430 Pfam Protein kinase domain 148 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1759 430 Gene3D Phosphorylase Kinase; domain 1 109 219 - -
Mtr3g1759 430 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 430 - -
Mtr3g1759 430 CDD STKc_IRAK 151 424 - -
Mtr3g1759 430 SMART serkin_6 145 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1759 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Mtr3g1759 430 ProSitePatterns Protein kinases ATP-binding region signature. 151 173 IPR017441 GO:0005524
Mtr3g1759 430 SUPERFAMILY Protein kinase-like (PK-like) 126 424 IPR011009 -
Mtr3g1759 430 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 430 - -
Mtr3g1759 430 Gene3D Transferase(Phosphotransferase) domain 1 220 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1759 Mtr-Chr3 29972556 29974436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1759 135 425 Trihelix Transcription Factor Family AT5G38560 40.741 4.52e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr3g1759 Pkinase 8.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1759 - - gmx:100806357 598.971