Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1758 ATGTCAAAGACAGTTTGTGTGACCGGAGCCAGCGGAGCCATCGGATCATGGGTGGTTCGCCTCCTCCTCGAACGAGGCTACACCGTCCATGCCACCATCCAAGATCTTGAGGATGAAAATGAGACAAAGCATTTGGAAGCAATGGAAGGAGCAAAGACTCGTCTCAAATTTTTTGAAATGGATCTTCTTAACAGTGACTCTATCGCGGCCGCCGTGAAAGGCTGTGCCGGTGTTATACACCTGGCATGTCCTAACATCATCGGTGAAGTCAAGGACCCCGAGAAGCAAATTTTGGAACCGGCAATTCAAGGAACGGTTAACGTGTTGAAGGTTGCAAAGGAAGCAGGGGTGGAGCGTGTGGTGGCGACGTCGTCGATCTCCGCCATCATACCGAGTCCTAGCTGGCCAGCTGATAAGATTAAGGCAGAGGATTGTTGGACGGACCTTGAATATTGCAAGGAAAAGAAGTTATACTACCCCATTGCAAAGACACTAGCAGAAAAAGCTGGTTGGGAATTTGCTAAAGAGACTGGTTTTGATGTGGTCATGATTAACCCTGGTACAGCATTGGGCCCTTTGATTCCACCAAGAATTAACTCAAGCATGGCTGTACTTGCTGGTGTTCTCAAAGGTGACAAAGAGACATATGAGGACTTCTTCATGGGAATGGCTCATTTTAAAGACATAGCTTTGGCACATATTTTGGGATTTGAGCAAAAGAAAGCATCTGGAAGGCATTTGTGTGTGGAAGCTATTCGTCACTATAGTGATTTTGTGAATTTGGTTGCAGAGTTATACCCTGAATATAATGTGGCAAAGATACCAACGGATACTCAACCTGGATTGTTGAGAGCAAAGAATGCATCAAAGAAGCTGATTGAATTAGGGTTAGAGTTCACTCCAGCAGAAGAAATTATCAAGGATGCAGTTGAGTGTTTGAAGAGTAGAGGTTTGGTTTAA 960 0.451 MSKTVCVTGASGAIGSWVVRLLLERGYTVHATIQDLEDENETKHLEAMEGAKTRLKFFEMDLLNSDSIAAAVKGCAGVIHLACPNIIGEVKDPEKQILEPAIQGTVNVLKVAKEAGVERVVATSSISAIIPSPSWPADKIKAEDCWTDLEYCKEKKLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALGPLIPPRINSSMAVLAGVLKGDKETYEDFFMGMAHFKDIALAHILGFEQKKASGRHLCVEAIRHYSDFVNLVAELYPEYNVAKIPTDTQPGLLRAKNASKKLIELGLEFTPAEEIIKDAVECLKSRGLV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1758 319 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Mtr3g1758 319 Gene3D - 1 319 - -
Mtr3g1758 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Mtr3g1758 319 CDD FR_SDR_e 5 297 - -
Mtr3g1758 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Mtr3g1758 319 Pfam NAD dependent epimerase/dehydratase family 5 200 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1758 Mtr-Chr3 29967797 29972443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1758 3 319 Monolignol Biosynthesis Gene Families AT5G58490 65.300 1.05e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1758 - - gmx:100806281 543.117