Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1740 ATGGCTGCTGAGCAAGGTGATCGATGTTCCTCCATTGAAGTACCACTTTTGGTTGATGAAAAGGTTTATCAAGTGAATGATTCAAAAAATAAGGATGAATACCACATGGTTCATGTGGGTAACGCTTCTTCATTCAAGACTTGCTTCCATCTAGTTAATGCTATCTCAGGTGTTGGTATTGTCTCAATACCTTATGCACTAGCATCTGGAGGATGGTTAAGCATTTTGCTACTATTCACAATAGCCATAGCATGTTGTTACACAGGCACATTGGTCAAAAAATGCATGGACATGGACCTTAATATCAGAACCTTTCCAGACATAGGTCAACATGCATTTGGATCAAAAGGGAGATTAATGGTATCAATCATCATGAATTCTGAGCTCTATCTTGCTGTAACAGGTTTTCTTATTTTAGAAGGAGACAACCTTAACAAACTTGTACCGAACGTGCAAATTCACCTAGCAGGATTAACAATTGGTGGCACAACAATGTTTACTATGGTTACTGCTCTTGTTATTTTGCCTACTGTTTTGTTAGAGGACATGAGTTTGTTGTCTTATGTTTCTGCTGGTGGTGCTTTAGCTTCTTCGATCTTCATCGTTTCTTTGTTGTGGAATGGTGCAATTGATGGAACAGGGTTTCATGGAAAAGGAAGGGTTTTTAGATGGAGTGGAATACCTTCTGCTGTTAGTTTGTTTGCCTTTTGTTATAGTGCTCATCCAATTCTTCCTACTCTCTACAATTCGATGAGGGACAAAAGTCGGTTTTACAGTGTCCTATCTGCAAGCTTTTTGGCATGCACATTTGGCTATGCAGCAGCAGCAATTCTAGGGTACTTAATGTTTGGAGAAGAAGTTGAATCACAGGTAACATTAAACCTCCAAACAGGAAAGTTGAGTTCAAGAGTGGCAATATATACTACCTTAGTCAATCCAATAGCAAAATATGCATTAATGCTTACTCCAGTCATAAATGCTATAAAAATGAAGGTTTCATGCAATTATTACAACAAAAGGGTCACACATATGATTATTAGTACATCTTTATTAGTAGGTTCTCTTACTATAGCTGTGACCATTCCCTTATTTGGATATCTTATGTCACTTGTTGGAGCATTGTTAAGTGTCTCAGCTTCAATTTTAGTGCCATCAATTTGCTACTTGAAGATTTCAGGATCATACAAGAGATTTGGGTGTGAAATGGTTATTAATTATTCAATAATTGTAATGGGGGTTGCTATTGCTGTTTTTGGTACTTATAGATCTCTTGTAGATATAATTCAGAATTTGTAA 1296 0.3696 MAAEQGDRCSSIEVPLLVDEKVYQVNDSKNKDEYHMVHVGNASSFKTCFHLVNAISGVGIVSIPYALASGGWLSILLLFTIAIACCYTGTLVKKCMDMDLNIRTFPDIGQHAFGSKGRLMVSIIMNSELYLAVTGFLILEGDNLNKLVPNVQIHLAGLTIGGTTMFTMVTALVILPTVLLEDMSLLSYVSAGGALASSIFIVSLLWNGAIDGTGFHGKGRVFRWSGIPSAVSLFAFCYSAHPILPTLYNSMRDKSRFYSVLSASFLACTFGYAAAAILGYLMFGEEVESQVTLNLQTGKLSSRVAIYTTLVNPIAKYALMLTPVINAIKMKVSCNYYNKRVTHMIISTSLLVGSLTIAVTIPLFGYLMSLVGALLSVSASILVPSICYLKISGSYKRFGCEMVINYSIIVMGVAIAVFGTYRSLVDIIQNL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1740 431 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 429 - -
Mtr3g1740 431 Pfam Transmembrane amino acid transporter protein 41 423 IPR013057 -
Mtr3g1740 431 PANTHER OS05G0424000 PROTEIN-RELATED 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1740 Mtr-Chr3 29805103 29810327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1740 28 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.616 4.16e-155 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1740 K15015 - gmx:100784690 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1740 3 29805103 29810327 Mtr3g1740 3 29805103 29810327 ECH